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Bacterial Infections and Mycoses

Free Subscription Articles published in J Clin Microbiol Retrieve available abstracts of 258 articles: HTML format

Single Articles

April 2024
1. MORENO A, Mah J, Budvytiene I, Ho DY, et al
   Dynamics and prognostic value of plasma cell-free DNA PCR in patients with invasive aspergillosis and mucormycosis.
   J Clin Microbiol. 2024 Apr 11:e0039424. doi: 10.1128/jcm.00394.
   PubMed     Abstract available
   
   
   
2. STREVA VA, Weinstein J, Jankowski-Romano C, Osakwe N, et al
   The Brief Case: Incidental finding of Brucella abortus bacteremia in a patient with urinary tract infection.
   J Clin Microbiol. 2024;62:e0138123.
   PubMed    
   
   
   
3. WEEBER P, Singh N, Lapierre P, Mingle L, et al
   A novel hybridization capture method for direct whole genome sequencing of clinical specimens to inform Legionnaires' disease investigations.
   J Clin Microbiol. 2024;62:e0130523.
   PubMed     Abstract available
   
   
   
4. ITO A, Ishida T, Tachibana H, Nakanishi Y, et al
   Identification rate of Legionella species in non-purulent sputum culture is comparable to that in purulent sputum culture in Legionella pneumonia.
   J Clin Microbiol. 2024;62:e0166523.
   PubMed     Abstract available
   
   
   
5. GIFFEN SR, Stoeppler E, Elliott A, Miller MB, et al
   Evaluation of analyte-specific reagents for the direct detection of Pneumocystis jirovecii.
   J Clin Microbiol. 2024;62:e0004524.
   PubMed     Abstract available
   
   
   
6. GHANEM-ZOUBI N, Mustafa-Hellou M, Zahran M, Gazit L, et al
   The integration of Coxiella burnetii PCR testing in serum into the diagnostic algorithm of suspected acute Q fever in an endemic setting.
   J Clin Microbiol. 2024;62:e0170323.
   PubMed     Abstract available
   
   
   
7. WALSH TJ, Mencacci A, Paggi R, Douka E, et al
   Prospective observational pilot study of the T2Resistance panel in the T2Dx system for detection of resistance genes in bacterial bloodstream infections.
   J Clin Microbiol. 2024;62:e0129623.
   PubMed     Abstract available
   
   
   
8. PENG Y, Williams MM, Xiaoli L, Simon A, et al
   Strengthening Bordetella pertussis genomic surveillance by direct sequencing of residual positive specimens.
   J Clin Microbiol. 2024;62:e0165323.
   PubMed     Abstract available
   
   
   
9. MCELVANIA E, Mindel S, Lemstra J, Brands K, et al
   Automated detection of methicillin-resistant Staphylococcus aureus with the MRSA CHROM imaging application on BD Kiestra Total Lab Automation System.
   J Clin Microbiol. 2024 Apr 1:e0144523. doi: 10.1128/jcm.01445.
   PubMed     Abstract available
   
   
   March 2024
10. SIOPI M, Pachoulis I, Leventaki S, Spruijtenburg B, et al
    Evaluation of the Vitek 2 system for antifungal susceptibility testing of Candida auris using a representative international panel of clinical isolates: overestimation of amphotericin B resistance and underestimation of fluconazole resistance.
    J Clin Microbiol. 2024 Mar 19:e0152823. doi: 10.1128/jcm.01528.
    PubMed     Abstract available
    
    
    
11. WOOD RC, Luabeya AK, Dragovich RB, Olson AM, et al
    Diagnostic accuracy of tongue swab testing on two automated tuberculosis diagnostic platforms, Cepheid Xpert MTB/RIF Ultra and Molbio Truenat MTB Ultima.
    J Clin Microbiol. 2024 Mar 14:e0001924. doi: 10.1128/jcm.00019.
    PubMed     Abstract available
    
    
    
12. GIFFEN SR, Alby K
    The Brief Case: A case of bloodstream infection with Corynebacterium kroppenstedtii in an infant.
    J Clin Microbiol. 2024;62:e0082023.
    PubMed    
    
    
    
13. WENGENACK NL, Brown-Elliott BA, Parrish NM, Salfinger M, et al
    This is giving me a complex: a practical attempt to streamline nontuberculous mycobacteria nomenclature for clinical purposes.
    J Clin Microbiol. 2024;62:e0153123.
    PubMed    
    
    
    
14. CALDWELL M, Tisdale J, Khare R
    Improved recovery of nontuberculous mycobacteria in culture with adjunctive use of a selective agar.
    J Clin Microbiol. 2024;62:e0167823.
    PubMed    
    
    
    
15. PEIRANO G, Castellanos LR, Matsumura Y, Chaffee R, et al
    Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131.
    J Clin Microbiol. 2024;62:e0168723.
    PubMed     Abstract available
    
    
    
16. LUUKINEN B, Antikainen J, Aittoniemi J, Miikkulainen-Lahti T, et al
    Evaluation of the FluoroType Mycobacteria assay for identification of mycobacteria.
    J Clin Microbiol. 2024;62:e0105423.
    PubMed     Abstract available
    
    
    
17. RANGANATH N, Mendoza MA, Stevens R, Kind D, et al
    Rhodococcus infection: a 10-year retrospective analysis of clinical experience and antimicrobial susceptibility profile.
    J Clin Microbiol. 2024;62:e0153723.
    PubMed     Abstract available
    
    
    
18. VINAYARAJ EV, Thakur CK, Negi P, Sreenath K, et al
    Epidemiological, clinical, and laboratory characteristics of human granulocytic anaplasmosis in North India.
    J Clin Microbiol. 2024;62:e0104823.
    PubMed     Abstract available
    
    
    
19. IYER V, Castro D, Malla B, Panda B, et al
    Culture-independent identification of bloodstream infections from whole blood: prospective evaluation in specimens of known infection status.
    J Clin Microbiol. 2024;62:e0149823.
    PubMed     Abstract available
    
    
    
20. DESRUISSEAUX C, Broderick C, Lavergne V, Sy K, et al
    Retrospective validation of MetaSystems' deep-learning-based digital microscopy platform with assistance compared to manual fluorescence microscopy for detection of mycobacteria.
    J Clin Microbiol. 2024;62:e0106923.
    PubMed     Abstract available
    
    
    
21. TRAM TTB, Trieu LPT, Nhat LTH, Thu DDA, et al
    Targeted sequencing from cerebrospinal fluid for rapid identification of drug-resistant tuberculous meningitis.
    J Clin Microbiol. 2024 Mar 11:e0128723. doi: 10.1128/jcm.01287.
    PubMed     Abstract available
    
    
    February 2024
22. PALAVECINO EL, Campodonico VL, She RC
    Laboratory approaches to determining blood culture contamination rates: an ASM Laboratory Practices Subcommittee report.
    J Clin Microbiol. 2024;62:e0102823.
    PubMed     Abstract available
    
    
    January 2024
23. MCTAGGART LR, Eshaghi A, Hota S, Poutanen SM, et al
    Erratum for McTaggart et al., "First Canadian report of transmission of fluconazole-resistant Candida parapsilosis within two hospital networks confirmed by genomic analysis".
    J Clin Microbiol. 2024 Jan 26:e0009824. doi: 10.1128/jcm.00098.
    PubMed    
    
    
    
24. DRAIN PK, Dalmat RR
    The elusive allure of a rapid host blood signature for tuberculosis disease.
    J Clin Microbiol. 2024 Jan 25:e0128923. doi: 10.1128/jcm.01289.
    PubMed     Abstract available
    
    
    
25. MISAS E, Seagle E, Jenkins EN, Rajeev M, et al
    Genomic description of acquired fluconazole- and echinocandin-resistance in patients with serial Candida glabrata isolates.
    J Clin Microbiol. 2024 Jan 24:e0114023. doi: 10.1128/jcm.01140.
    PubMed     Abstract available
    
    
    
26. MOTZER AR, Mudroch S, Schultz S, Sullivan KV, et al
    The Brief Case: Bartonella quintana aortic and mitral valve endocarditis identified through 16S rRNA sequencing.
    J Clin Microbiol. 2024;62:e0040223.
    PubMed    
    
    
    
27. CHERKAOUI A, Renzi G, Schrenzel J
    Evaluation of PhenoMATRIX and PhenoMATRIX PLUS for the screening of MRSA from nasal and inguinal/perineal swabs using chromogenic media.
    J Clin Microbiol. 2024;62:e0115223.
    PubMed     Abstract available
    
    
    
28. DUMM RE, Burnham C-AD, Hink T, Reske KA, et al
    Comparison of Clostridioides difficile nucleic acid amplification test (NAAT) results using fresh and frozen stool specimens and rectal swabs.
    J Clin Microbiol. 2024;62:e0103723.
    PubMed     Abstract available
    
    
    
29. SMITH RD, Zhan M, Zhang S, Leekha S, et al
    Comparison of three rapid diagnostic tests for bloodstream infections using Benefit-risk Evaluation Framework (BED-FRAME).
    J Clin Microbiol. 2024;62:e0109623.
    PubMed     Abstract available
    
    
    
30. PFALLER MA, Carvalhaes CG, Rhomberg PR, Desphande LM, et al
    Trends in the activity of mold-active azole agents against Aspergillus fumigatus clinical isolates with and without cyp51 alterations from Europe and North America (2017-2021).
    J Clin Microbiol. 2024 Jan 9:e0114123. doi: 10.1128/jcm.01141.
    PubMed     Abstract available
    
    
    
31. SCHUETZ AN, Theel ES, Cole NC, Rothstein TE, et al
    Testing for Helicobacter pylori in an era of antimicrobial resistance.
    J Clin Microbiol. 2024 Jan 9:e0073223. doi: 10.1128/jcm.00732.
    PubMed     Abstract available
    
    
    December 2023
32. MCTAGGART LR, Eshaghi A, Hota S, Poutanen SM, et al
    First Canadian report of transmission of fluconazole-resistant Candida parapsilosis within two hospital networks confirmed by genomic analysis.
    J Clin Microbiol. 2023 Dec 19:e0116123. doi: 10.1128/jcm.01161.
    PubMed     Abstract available
    
    
    
33. XIA Z, Su B, Tu C, Sun S, et al
    Single-tube protocol for culture-independent spoligotyping of Mycobacterium tuberculosis based on MeltArray.
    J Clin Microbiol. 2023 Dec 19:e0118323. doi: 10.1128/jcm.01183.
    PubMed     Abstract available
    
    
    
34. PENG L, Fang T, Cai Q, Li H, et al
    Rapid detection of Mycobacterium tuberculosis in sputum using CRISPR-Cas12b combined with cross-priming amplification in a single reaction.
    J Clin Microbiol. 2023 Dec 19:e0092323. doi: 10.1128/jcm.00923.
    PubMed     Abstract available
    
    
    
35. LOCKHART SR, Smith DJ, Gold JAW
    Trichophyton indotineae and other terbinafine-resistant dermatophytes in North America.
    J Clin Microbiol. 2023;61:e0090323.
    PubMed     Abstract available
    
    
    
36. PARMAR K, Komarow L, Ellison DW, Filippov AA, et al
    Interlaboratory comparison of Pseudomonas aeruginosa phage susceptibility testing.
    J Clin Microbiol. 2023;61:e0061423.
    PubMed     Abstract available
    
    
    
37. PRYCE TM, Foti OR, Haygarth EJ, Whiley DM, et al
    Maximizing the Neisseria gonorrhoeae confirmatory rate and the genotypic detection of ciprofloxacin resistance for samples screened with cobas CT/NG.
    J Clin Microbiol. 2023 Dec 12:e0103923. doi: 10.1128/jcm.01039.
    PubMed     Abstract available
    
    
    
38. FREY E, Stapleton GS, Nichols MC, Gollarza LM, et al
    Antimicrobial resistance in multistate outbreaks of nontyphoidal Salmonella infections linked to animal contact-United States, 2015-2018.
    J Clin Microbiol. 2023 Dec 12:e0098123. doi: 10.1128/jcm.00981.
    PubMed     Abstract available
    
    
    
39. ZAPP A, Hudson H, Munson E, Thelen E, et al
    Serologic correlation of a research-use-only Treponema pallidum transcription-mediated amplification assay performed on rectal swabs from a longitudinal cohort of young men who have sex with men.
    J Clin Microbiol. 2023 Dec 4:e0135123. doi: 10.1128/jcm.01351.
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40. WAN T-W, Lee T-F, Chen X-J, Hunag Y-T, et al
    Performance assessment of the Bruker Biotyper MALDI-TOF MS for the identification of difficult-to-identify viridans group streptococci.
    J Clin Microbiol. 2023 Dec 1:e0114323. doi: 10.1128/jcm.01143.
    PubMed     Abstract available
    
    
    November 2023
41. LIEU A, Lee TC, Lawandi A, Tellier R, et al
    Microbiological characterization of Pneumocystis jirovecii pneumonia using quantitative PCR from nasopharyngeal specimens: a retrospective study in a Canadian province from 2019 to 2023.
    J Clin Microbiol. 2023;61:e0091323.
    PubMed     Abstract available
    
    
    
42. ESSE J, Trager J, Valenza G, Bogdan C, et al
    Rapid phenotypic antimicrobial susceptibility testing of Gram-negative rods directly from positive blood cultures using the novel Q-linea ASTar system.
    J Clin Microbiol. 2023;61:e0054923.
    PubMed     Abstract available
    
    
    
43. MA A, Ferrato C, Martin I, Smyczek P, et al
    Use of genome sequencing to resolve differences in gradient diffusion and agar dilution antimicrobial susceptibility testing performance of Neisseria gonorrhoeae isolates in Alberta, Canada.
    J Clin Microbiol. 2023;61:e0060623.
    PubMed     Abstract available
    
    
    
44. TRAGER J, Drager S, Mihai S, Cipa F, et al
    Detailed beta-(1-->3)-D-glucan and mannan antigen kinetics in patients with candidemia.
    J Clin Microbiol. 2023;61:e0059823.
    PubMed     Abstract available
    
    
    
45. HENARES D, Lo SW, Perez-Arguello A, Redin A, et al
    Comparison of next generation technologies and bioinformatics pipelines for capsular typing of Streptococcus pneumoniae.
    J Clin Microbiol. 2023 Nov 21:e0074123. doi: 10.1128/jcm.00741.
    PubMed     Abstract available
    
    
    
46. BHATNAGAR AS, Machado M-J, Patterson L, Anderson K, et al
    Antimicrobial Resistance Laboratory Network's multisite evaluation of the ThermoFisher Sensititre GN7F broth microdilution panel for antimicrobial susceptibility testing.
    J Clin Microbiol. 2023 Nov 16:e0079923. doi: 10.1128/jcm.00799.
    PubMed     Abstract available
    
    
    
47. SAKOULAS G, Nizet V
    Measuring beta-lactam minimum inhibitory concentrations in Staphylococcus aureus in the clinical microbiology laboratory: pinning the tail on the donkey.
    J Clin Microbiol. 2023 Nov 15:e0036623. doi: 10.1128/jcm.00366.
    PubMed     Abstract available
    
    
    October 2023
48. LI M, Qiu Y, Guo M, Qu R, et al
    Evaluation of the Cepheid 3-gene host response blood test for tuberculosis diagnosis and treatment response monitoring in a primary-level clinic in rural China.
    J Clin Microbiol. 2023 Oct 30:e0091123. doi: 10.1128/jcm.00911.
    PubMed     Abstract available
    
    
    
49. LUO Z, Ning Y, Yu S, Xiao M, et al
    The first established microsatellite markers to distinguish Candida orthopsilosis isolates and detection of a nosocomial outbreak in China.
    J Clin Microbiol. 2023 Oct 25:e0080623. doi: 10.1128/jcm.00806.
    PubMed     Abstract available
    
    
    
50. ISLAM MR, Sharma MK, KhunKhun R, Shandro C, et al
    Whole genome sequencing-based identification of human tuberculosis caused by animal-lineage Mycobacterium orygis.
    J Clin Microbiol. 2023 Oct 25:e0026023. doi: 10.1128/jcm.00260.
    PubMed     Abstract available
    
    
    
51. THORBURN C, Ortiz DA, Gowda N, Dhawan S, et al
    The Brief Case: A febrile illness from a pesky passenger from Upstate New York.
    J Clin Microbiol. 2023;61:e0177622.
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52. DERBYSHIRE KM, Salfinger M
    Plasmid-mediated drug resistance in mycobacteria: the tip of the iceberg?
    J Clin Microbiol. 2023;61:e0062823.
    PubMed     Abstract available
    
    
    
53. LU J, Banaei N
    Investigation of discordant positive Sona lateral flow assay results for detection of Coccidioides antibodies.
    J Clin Microbiol. 2023;61:e0062323.
    PubMed    
    
    
    
54. BUCKWALTER SP, Olson SL, Fida M, Epperson LE, et al
    Mycobacterium abscessus subspecies identification using the Deeplex Myc-TB targeted NGS assay.
    J Clin Microbiol. 2023;61:e0048923.
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55. KOEPPEL L, Denkinger CM, Wyss R, Broger T, et al
    Diagnostic performance of host protein signatures as a triage test for active pulmonary TB.
    J Clin Microbiol. 2023;61:e0026423.
    PubMed     Abstract available
    
    
    
56. LU J, Murugesan K, Senchyna F, Budvytiene I, et al
    Accuracy of QuantiFERON in active tuberculosis suspects with comorbidities and nontuberculous mycobacterial infection in Northern California.
    J Clin Microbiol. 2023 Oct 16:e0077523. doi: 10.1128/jcm.00775.
    PubMed     Abstract available
    
    
    
57. LIU B, Gao J, Liu XF, Rao G, et al
    Direct prediction of carbapenem resistance in Pseudomonas aeruginosa by whole genome sequencing and metagenomic sequencing.
    J Clin Microbiol. 2023 Oct 12:e0061723. doi: 10.1128/jcm.00617.
    PubMed     Abstract available
    
    
    
58. TOOROP MMA, Kraakman MEM, Hoogendijk IV, van Prehn J, et al
    A core-genome multilocus sequence typing scheme for the detection of genetically related Streptococcus pyogenes clusters.
    J Clin Microbiol. 2023 Oct 10:e0055823. doi: 10.1128/jcm.00558.
    PubMed     Abstract available
    
    
    September 2023
59. SY I, Buhler N, Becker SL, Jung P, et al
    Evaluation of the Qvella FAST System and the FAST-PBC cartridge for rapid species identification and antimicrobial resistance testing directly from positive blood cultures.
    J Clin Microbiol. 2023 Sep 28:e0056923. doi: 10.1128/jcm.00569.
    PubMed     Abstract available
    
    
    
60. ZHANG X, Lam C, Martinez E, Sim E, et al
    Genomic markers of drug resistance in Mycobacterium tuberculosis populations with minority variants.
    J Clin Microbiol. 2023 Sep 26:e0048523. doi: 10.1128/jcm.00485.
    PubMed     Abstract available
    
    
    
61. GRILL FJ, Svarovsky S, Gonzalez-Moa M, Kaleta E, et al
    Development of a rapid lateral flow assay for detection of anti-coccidioidal antibodies.
    J Clin Microbiol. 2023;61:e0063123.
    PubMed     Abstract available
    
    
    
62. DREVINEK P, Hollweck R, Lorenz MG, Lustig M, et al
    Direct 16S/18S rRNA Gene PCR Followed by Sanger Sequencing as a Clinical Diagnostic Tool for Detection of Bacterial and Fungal Infections: a Systematic Review and Meta-Analysis.
    J Clin Microbiol. 2023;61:e0033823.
    PubMed     Abstract available
    
    
    
63. MANN BC, Jacobson KR, Ghebrekristos Y, Warren RM, et al
    Assessment and validation of enrichment and target capture approaches to improve Mycobacterium tuberculosis WGS from direct patient samples.
    J Clin Microbiol. 2023 Sep 20:e0038223. doi: 10.1128/jcm.00382.
    PubMed     Abstract available
    
    
    
64. SUNDELIN T, Bialas J, de Diego J, Hermanowski M, et al
    Evaluation of the QIAstat-Dx Meningitis/Encephalitis Panel, a multiplex PCR platform for the detection of community-acquired meningoencephalitis.
    J Clin Microbiol. 2023 Sep 13:e0042623. doi: 10.1128/jcm.00426.
    PubMed     Abstract available
    
    
    
65. DECHENE-TEMPIER M, Jouy E, Bayon-Auboyer MH, Bougeard S, et al
    Antimicrobial resistance profiles of Streptococcus suis isolated from pigs, wild boars, and humans in France between 1994 and 2020.
    J Clin Microbiol. 2023 Sep 1:e0016423. doi: 10.1128/jcm.00164.
    PubMed     Abstract available
    
    
    August 2023
66. PENVEN M, Petsaris O, Piau C, Bossart C, et al
    Photo Quiz: Bacteremia caused by an "uncultivable" curved Gram-negative rod.
    J Clin Microbiol. 2023;61:e0009723.
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67. PENVEN M, Petsaris O, Piau C, Bossart C, et al
    Answer to the Photo Quiz: Bacteremia caused by an "uncultivable" curved Gram-negative rod.
    J Clin Microbiol. 2023;61:e0009823.
    PubMed    
    
    
    
68. LAPP Z, Octaria R, O'Malley SM, Nguyen TN, et al
    Distinct Origins and Transmission Pathways of bla(KPC) Enterobacterales across Three U.S. States.
    J Clin Microbiol. 2023;61:e0025923.
    PubMed     Abstract available
    
    
    
69. MORENO E, Middlebrook EA, Altamirano-Silva P, Al Dahouk S, et al
    If You're Not Confused, You're Not Paying Attention: Ochrobactrum Is Not Brucella.
    J Clin Microbiol. 2023;61:e0043823.
    PubMed     Abstract available
    
    
    
70. MUZNY CA, Cerca N, Elnaggar JH, Taylor CM, et al
    State of the Art for Diagnosis of Bacterial Vaginosis.
    J Clin Microbiol. 2023;61:e0083722.
    PubMed     Abstract available
    
    
    July 2023
71. TONELLI M, Knutsson KA, Buffoli F, Carletti S, et al
    Photo Quiz: Therapeutic Contact Lens-Associated Fungal Keratitis.
    J Clin Microbiol. 2023;61:e0007423.
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72. RUFFIER D'EPENOUX L, Fayoux E, Guillouzouic A, Lecomte R, et al
    The Brief Case: A Mixed Cutibacterium Species Positive Valve Culture Hiding a Bartonella Infective Endocarditis.
    J Clin Microbiol. 2023;61:e0076822.
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73. BRUMWELL A, Sutton G, Lantos PM, Hoffman K, et al
    Escherichia coli ST131 Associated with Increased Mortality in Bloodstream Infections from Urinary Tract Source.
    J Clin Microbiol. 2023;61:e0019923.
    PubMed     Abstract available
    
    
    
74. HONG HL, Flurin L, Greenwood-Quaintance KE, Wolf MJ, et al
    16S rRNA Gene PCR/Sequencing of Heart Valves for Diagnosis of Infective Endocarditis in Routine Clinical Practice.
    J Clin Microbiol. 2023 Jul 12:e0034123. doi: 10.1128/jcm.00341.
    PubMed     Abstract available
    
    
    
75. HUMPHRIES RM, Lu J, Martin I, Rauch CA, et al
    Detection of Penicillin Nonsusceptible Streptococcus agalactiae by Laboratories That Participate in the College of American Pathologist's Proficiency Testing Program.
    J Clin Microbiol. 2023 Jul 10:e0059523. doi: 10.1128/jcm.00595.
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    June 2023
76. PILLAY S, de Vos M, Sohn H, Ghebrekristos Y, et al
    To Test or Not? Xpert MTB/RIF as an Alternative to Smear Microscopy to Guide Line Probe Assay Testing for Drug-Resistant Tuberculosis.
    J Clin Microbiol. 2023 Jun 27:e0001723. doi: 10.1128/jcm.00017.
    PubMed     Abstract available
    
    
    
77. BROWN-ELLIOTT BA, Wallace RJ Jr, Wengenack NL, Workman SD, et al
    Emergence of Inducible Macrolide Resistance in Mycobacterium chelonae Due to Broad-Host-Range Plasmid and Chromosomal Variants of the Novel 23S rRNA Methylase Gene, erm(55).
    J Clin Microbiol. 2023 Jun 22:e0042823. doi: 10.1128/jcm.00428.
    PubMed     Abstract available
    
    
    
78. MUNSON E, Zapp A, Moore J, Lavey SC, et al
    Optimization and Clinical Evaluation of an Automated Commercial Analyte-Specific Reagent Assay for Mycoplasmoides genitalium Macrolide Resistance Detection in Primary Clinical Specimens.
    J Clin Microbiol. 2023 Jun 21:e0033523. doi: 10.1128/jcm.00335.
    PubMed     Abstract available
    
    
    
79. ZHU Y, Gan M, Ge M, Dong X, et al
    Diagnostic Performance and Clinical Impact of Metagenomic Next-Generation Sequencing for Pediatric Infectious Diseases.
    J Clin Microbiol. 2023;61:e0011523.
    PubMed     Abstract available
    
    
    
80. FAJLOUN F, Ganlonon L, Gnimavo RS, Sodjinou E, et al
    An Overview of 10 Years of Activity of a Molecular Laboratory for Buruli Ulcer Diagnosis at a Field Hospital in Benin.
    J Clin Microbiol. 2023;61:e0027423.
    PubMed     Abstract available
    
    
    
81. GATO E, Arroyo MJ, Mendez G, Candela A, et al
    Direct Detection of Carbapenemase-Producing Klebsiella pneumoniae by MALDI-TOF Analysis of Full Spectra Applying Machine Learning.
    J Clin Microbiol. 2023;61:e0175122.
    PubMed     Abstract available
    
    
    
82. BURON V, Banaei N
    Inflated Gamma Interferon Response with QuantiFERON-TB Gold Plus Using the Automated Liaison XL Analyzer: a Testing Algorithm To Mitigate False-Positive Results in Low-Incidence Settings.
    J Clin Microbiol. 2023;61:e0029523.
    PubMed     Abstract available
    
    
    May 2023
83. CHEN X, Li R, Ge S, Li Y, et al
    Rapid Detection of Extensive Drug Resistance by Xpert MTB/XDR Optimizes Therapeutic Decision-Making in Rifampin-Resistant Tuberculosis Patients.
    J Clin Microbiol. 2023 May 30:e0183222. doi: 10.1128/jcm.01832.
    PubMed     Abstract available
    
    
    
84. RHOADS DD, Pournaras S, Leber A, Balada-Llasat JM, et al
    Multicenter Evaluation of the BIOFIRE Blood Culture Identification 2 Panel for Detection of Bacteria, Yeasts, and Antimicrobial Resistance Genes in Positive Blood Culture Samples.
    J Clin Microbiol. 2023 May 25:e0189122. doi: 10.1128/jcm.01891.
    PubMed     Abstract available
    
    
    
85. FLIPSE J, Niekamp AM, Dirks A, Dukers-Muijrers NHTM, et al
    Refining Timely Diagnosis of Early Syphilis by Using Treponema pallidum PCR or IgM Immunoblotting Next to Conventional Serology for Syphilis.
    J Clin Microbiol. 2023 May 24:e0011223. doi: 10.1128/jcm.00112.
    PubMed     Abstract available
    
    
    
86. RUEGAMER T, Harrer DC, Simon M, Sandner AS, et al
    Photo Quiz: Gram-Positive Meningitis following Allogeneic Stem Cell Transplantation.
    J Clin Microbiol. 2023;61:e0133922.
    PubMed    
    
    
    
87. RUEGAMER T, Harrer DC, Simon M, Sandner AS, et al
    Answer to May 2023 Photo Quiz.
    J Clin Microbiol. 2023;61:e0134022.
    PubMed     Abstract available
    
    
    
88. MAKI JJ, Howard M, Connelly S, Pettengill MA, et al
    Species Delineation and Comparative Genomics within the Campylobacter ureolyticus Complex.
    J Clin Microbiol. 2023;61:e0004623.
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89. WORLEY JN, Crothers JW, Wolfgang WJ, Venkata SLG, et al
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90. MCHARDY IH, Barker B, Thompson GR 3rd
    Review of Clinical and Laboratory Diagnostics for Coccidioidomycosis.
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91. SHUKLA MR, Pereira L, Gaynor AM, Sun Y, et al
    Evaluation of Three Automated Nontreponemal Rapid Plasma Reagin (RPR) Tests for the Laboratory Diagnosis of Syphilis.
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92. ZHANG S, Chen X, Lin Z, Tan Y, et al
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    April 2023
93. BUIL JB, Huygens S, Dunbar A, Schauwvlieghe A, et al
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94. BRONCANO-LAVADO A, Barrado L, Lopez-Roa P, Cacho J, et al
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95. GANAIE FA, Saad JS, Lo SW, McGee L, et al
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96. ARMSTRONG DT, Eisemann E, Parrish N
    A Brief Update on Mycobacterial Taxonomy, 2020 to 2022.
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97. ODEBERG G, Blackberg A, Sunnerhagen T
    Infection or Contamination with Rothia, Kocuria, Arthrobacter and Pseudoglutamicibacter-a Retrospective Observational Study of Non-Micrococcus Micrococcaceae in the Clinic.
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98. FUKUSHIMA K, Matsumoto Y, Matsuki T, Saito H, et al
    MGIT-seq for the Identification of Nontuberculous Mycobacteria and Drug Resistance: a Prospective Study.
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99. LOPEZ JM, Zimic M, Vallejos K, Sevilla D, et al
    Quantitative (1)H Nuclear Magnetic Resonance Assay for the Rapid Detection of Pyrazinamide Resistance in Mycobacterium tuberculosis from Sputum Samples.
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100. TRAM TTB, Ha VTN, Trieu LPT, Ashton PM, et al
     FLASH-TB: an Application of Next-Generation CRISPR to Detect Drug Resistant Tuberculosis from Direct Sputum.
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     March 2023
101. HESS KA, Kooda K, Shulha JA, Mara K, et al
     Retrospective Evaluation of the Association of Oxacillin MIC on Acute Treatment Outcomes with Cefazolin and Antistaphylococcal Penicillins in Methicillin-Susceptible Staphylococcus aureus Bacteremia.
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102. ZHU Y, Hager KM, Manjari SR, Banavali NK, et al
     Development and Validation of TaqMan Chemistry Probe-Based Rapid Assay for the Detection of Echinocandin-Resistance in Candida auris.
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103. GRAMS TR, Kim DY, McElvania E
     The Brief Case: Bergeyella zoohelcum Bacteremia in an Immunocompromised 69-Year-Old Patient.
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104. GRAMS TR, Kim DY, McElvania E
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105. WALTERS C, Chen J, Stroika S, Katz LS, et al
     Genome Sequences from a Reemergence of Vibrio cholerae in Haiti, 2022 Reveal Relatedness to Previously Circulating Strains.
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106. NOPARATVARAKORN C, Sengyee S, Yarasai A, Phunpang R, et al
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107. WANG J, Guo K, Li S, Liu D, et al
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108. KANWAR N, Jackson J, Bardsley T, Pavia A, et al
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109. LILLIS RA, Parker RL, Ackerman R, Ackerman J, et al
     Clinical Evaluation of a New Molecular Test for the Detection of Organisms Causing Vaginitis and Vaginosis.
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110. GORANSSON J, Sundqvist M, Ghaderi E, Lisby JG, et al
     Performance of a System for Rapid Phenotypic Antimicrobial Susceptibility Testing of Gram-Negative Bacteria Directly from Positive Blood Culture Bottles.
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111. SCHILDKRAUT JA, Coolen JPM, Severin H, Koenraad E, et al
     MGIT Enriched Shotgun Metagenomics for Routine Identification of Nontuberculous Mycobacteria: a Route to Personalized Health Care.
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112. TRECOURT A, Rabodonirina M, Mauduit C, Traverse-Glehen A, et al
     Fungal Integrated Histomolecular Diagnosis Using Targeted Next-Generation Sequencing on Formalin-Fixed Paraffin-Embedded Tissues.
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113. SYED RR, Catanzaro DG, Colman RE, Cooney CG, et al
     Clinical Evaluation of the XDR-LFC Assay for the Molecular Detection of Isoniazid, Rifampin, Fluoroquinolone, Kanamycin, Capreomycin, and Amikacin Drug Resistance in a Prospective Cohort.
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114. WAITES KB, Crabb DM, Ratliff AE, Geisler WM, et al
     Latest Advances in Laboratory Detection of Mycoplasma genitalium.
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115. LU P, Wu K, Zhou H, Yu H, et al
     Evaluation of ESAT6-CFP10 Skin Test for Mycobacterium tuberculosis Infection among Persons Living with HIV in China.
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116. PUTNAM NE, Youn JH, Wallace MA, Luethy PM, et al
     Comparative Evaluation of Current Biochemical-, Sequencing-, and Proteomic-Based Identification Methods for the Streptococcus bovis Group.
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117. BLANCHARD LS, Armstrong TP, Kresken M, Emery CL, et al
     Multicenter Clinical Evaluation of ETEST Eravacycline for Susceptibility Testing of Enterobacteriaceae and Enterococci.
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     February 2023
118. NILGIRIWALA K, Rabodoarivelo MS, Hall MB, Patel G, et al
     Genomic Sequencing from Sputum for Tuberculosis Disease Diagnosis, Lineage Determination, and Drug Susceptibility Prediction.
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119. HELLMANN KT, Challagundla L, Gray BM, Robinson DA, et al
     Improved Genomic Prediction of Staphylococcus epidermidis Isolation Sources with a Novel Polygenic Score.
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120. ALONSO ACERO L, Roman Soto S, Rico Nieto A
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121. ALONSO ACERO L, Roman Soto S, Rico Nieto A
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122. MISRA A, Yetmar ZA, Milone AA, Ruefthaler LA, et al
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123. RANGANATH N, Shirley JD, Challener DW, Stevens RW, et al
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124. KRITIKOS A, Caruana G, Poissy J, Mamin A, et al
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125. MEYER S, Puechal X, Quesne G, Marques I, et al
     Contribution of PCR to Differential Diagnosis between Patients with Whipple Disease and Tropheryma whipplei Carriers.
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126. HOENIGL M, Egger M, Price J, Krause R, et al
     Metagenomic Next-Generation Sequencing of Plasma for Diagnosis of COVID-19-Associated Pulmonary Aspergillosis.
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127. LAURENTIE J, Mourand G, Grippon P, Furlan S, et al
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     January 2023
128. TETZ G, Kardava K, Vecherkovskaya M, Hahn A, et al
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129. RODRIGUEZ-TEMPORAL D, Herrera L, Alcaide F, Domingo D, et al
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130. WAGNER GE, Berner A, Lipp M, Kohler C, et al
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131. YU HJ, Kim TY, Kim G, Shim HJ, et al
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132. JHAVERI TA, Williams S, Kancharla S, Frame IJ, et al
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133. JHAVERI TA, Williams S, Kancharla S, Frame IJ, et al
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134. HERRERA LN, Hooper K, Ahmed H, Hofmann J, et al
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135. THWE PM, Faron ML, Pride DT, Cruz A, et al
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136. SAPKOTA J, Hasan R, Onsare R, Arafah S, et al
     Comparative Analysis of Commercially Available Typhoid Point-of-Care Tests: Results of a Prospective and Hybrid Retrospective Multicenter Diagnostic Accuracy Study in Kenya and Pakistan.
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137. IMBERT S, Portejoie L, Pfister E, Tauzin B, et al
     A Multiplex PCR and DNA-Sequencing Workflow on Serum for the Diagnosis and Species Identification for Invasive Aspergillosis and Mucormycosis.
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138. KALIZANG'OMA A, Kwambana-Adams B, Chan JM, Viswanath A, et al
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     November 2022
139. ABE R, Akeda Y, Sakamoto N, Takeuchi D, et al
     A Nationwide Plasmidome Surveillance in Thailand Reveals a Limited Variety of New Delhi Metallo-beta-Lactamase-Producing Carbapenem-Resistant Enterobacteriaceae Clones and Spreading Plasmids.
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140. MCCORMICK-BAW C, Clark AE, Knights S, Perl T, et al
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141. MCCORMICK-BAW C, Clark A, Knights S, Perl T, et al
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142. FOX-LEWIS A, Wang J, Strydom H, Wright J, et al
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143. AERTS R, Mercier T, Houben E, Schauwvlieghe A, et al
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144. BURNS BL, Rhoads DD
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145. BARKER KR, Kus JV, Normand AC, Gharabaghi F, et al
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146. GARDETTE M, Henin N, Le Roy C, Guiraud J, et al
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     October 2022
147. CHU CM, Woo PCY, Chong KTK, Leung WS, et al
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148. MALDONADO-BARRUECO A, Grandioso-Vas D, Rico-Nieto A, Garcia-Rodriguez J, et al
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150. DATTA K, LaRue R, Permpalung N, Das S, et al
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151. DUNMIRE CN, Chac D, Chowdhury F, Khan AI, et al
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153. LUCIGNANO B, Cento V, Agosta M, Ambrogi F, et al
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     September 2022
154. RANSOM EM, Burnham CD
     Routine Use of Anaerobic Blood Culture Bottles for Specimens Collected from Adults and Children Enhances Microorganism Recovery and Improves Time to Positivity.
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155. WANG SH, Rajaram MVS, Trollip A, Wu Q, et al
     Novel Automation of an Enzyme-Linked Immunosorbent Spot Assay Testing Method: Comparable Diagnostic Performance of the T-SPOT.TB Test Using Manual Density Gradient Cell Isolation versus Automated Positive Selection with the T-Cell Select Kit.
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158. HYCHE MH, Kent P, Schammel CMG, Devane M, et al
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161. SHAPIRO AE, Olson AM, Kidoguchi L, Niu X, et al
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163. AGARWAL AN, Chandler B, Dallas SD, Wiederhold NP, et al
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196. CENTURIONI DA, Egan CT, Perry MJ
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223. LOCKHART SR, Lyman MM, Sexton DJ
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236. ADAMSON PC, Klausner JD
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