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  Bacterial Infections and Mycoses

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13.04.2026

1 Am J Trop Med Hyg
1 Biochemistry
2 BMC Pediatr
1 Chemotherapy
17 Diagn Microbiol Infect Dis
3 Eur J Clin Microbiol Infect Dis
3 J Antimicrob Chemother
9 J Clin Microbiol
1 J Infect Dis
4 J Med Microbiol
2 JAMA
1 MMWR Morb Mortal Wkly Rep
2 PLoS Med
2 PLoS Negl Trop Dis
7 PLoS One
3 PLoS Pathog
1 Proc Natl Acad Sci U S A


  Retrieve available abstracts of this week’s articles:
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Single Articles


    Am J Trop Med Hyg

  1. IZUDI J, Ng'oda M, Sekaggya-Wiltshire C, Sammann A, et al
    Rapid Review of Community Pharmacies and Potential for Expanded Access for the Treatment of HIV Infection and/or Tuberculosis in Sub-Saharan Africa.
    Am J Trop Med Hyg. 2026 Apr 9:tpmd250623. doi: 10.4269/ajtmh.25-0623.
    PubMed         Abstract available


    Biochemistry

  2. DEL RIO FLORES A, Phan H, Lynch SR, Liu L, et al
    Mechanistic Analysis of Programmed Iteration by Module 5 of the Nocardiosis-Associated Polyketide (NOCAP) Synthase.
    Biochemistry. 2026;65:1047-1055.
    PubMed         Abstract available


    BMC Pediatr

  3. YAKIN H, Acikalin B, Demir OO, Aykac K, et al
    Comparison of vancomycin sensitive and resistant enterococcal infection in children.
    BMC Pediatr. 2026 Apr 9. doi: 10.1186/s12887-026-06808.
    PubMed        

  4. KONG KL, Yu HR, Liu TT, Tiao MM, et al
    Case report - giant duodenal ulcer with Candida infection in a relatively healthy child.
    BMC Pediatr. 2026 Apr 6. doi: 10.1186/s12887-026-06811.
    PubMed        


    Chemotherapy

  5. WANG X, Geng D, Wu X, Guo Z, et al
    Efficacy and safety study of different doses of linezolid in combination with bedaquiline in the treatment of drug-resistant pulmonary tuberculosis.
    Chemotherapy. 2026 Apr 8:1-17. doi: 10.1159/000551380.
    PubMed         Abstract available


    Diagn Microbiol Infect Dis

  6. VILLANUEVA-REYES J, Gonzalez-Rios AM, Crespo-Ortiz MDP, Alvarez-Valle MI, et al
    Comparative evaluation of conventional and nanopore approaches in onychomycosis diagnosis.
    Diagn Microbiol Infect Dis. 2026;115:117348.
    PubMed         Abstract available

  7. SHUKLA M, Butler K, Pettus K, Herrell K, et al
    Assessing the usefulness of antibody index values from treponemal immunoassays to reduce confirmatory syphilis testing in the reverse algorithm.
    Diagn Microbiol Infect Dis. 2026;115:117355.
    PubMed         Abstract available

  8. SUREKA N, Chohan S, Ahuja S, TeenaTeena, et al
    Mycobacterium avium complex presenting as an infected epidermal inclusion cyst of breast: a rare case report.
    Diagn Microbiol Infect Dis. 2026;115:117344.
    PubMed         Abstract available

  9. COTAR AI, Oprea M, Dinu S, Popa LI, et al
    A case of Legionnaires' disease linked to the household hot water system, confirmed by whole genome sequencing.
    Diagn Microbiol Infect Dis. 2026;115:117357.
    PubMed         Abstract available

  10. LIU Y, Gui ML, Shu L, Yuan T, et al
    A case report of rhino-orbital-cerebral invasive infection caused by co-infection with Pleurostoma ootheca and Mucorales.
    Diagn Microbiol Infect Dis. 2026;115:117341.
    PubMed         Abstract available

  11. OZ M, Keskin E, Cubuk F, Oksuz C, et al
    Evaluation of the relationship between signal time in blood cultures and clinical findings in brucellosis cases.
    Diagn Microbiol Infect Dis. 2026;115:117369.
    PubMed         Abstract available

  12. SINGH B, Guleria P, Sharma A, Rana A, et al
    From obstacles to opportunities: Innovations and evolution of strategies in scrub typhus vaccine research.
    Diagn Microbiol Infect Dis. 2026;115:117351.
    PubMed         Abstract available

  13. GODOY-CORREDOR M, Sierra-Parada CR, Colmenares-Mejia CC, Suarez-Ramos P, et al
    Diagnostic accuracy of short-incubation cultures versus standard protocols for bacterial identification and susceptibility testing via VITEK(R) MS and VITEK(R)2 XL.
    Diagn Microbiol Infect Dis. 2026;115:117358.
    PubMed         Abstract available

  14. CHARAZAC A, Vingerhoets S, Michaud A, Brault R, et al
    Culture-negative osteoarticular infection caused by Legionella sainthelensi.
    Diagn Microbiol Infect Dis. 2026;115:117380.
    PubMed         Abstract available

  15. ZHANG P, Chen L, Gu J, Mao L, et al
    First documented case of Siphonobacter curvatus bloodstream infection in an elderly patient with biliary abnormalities and suspected immune dysregulation.
    Diagn Microbiol Infect Dis. 2026;115:117372.
    PubMed         Abstract available

  16. JAGLAL P, Lowe M, Featherston J, Han KSS, et al
    Decoding genotypic antimicrobial resistance amongst colistin-resistant Gram-negative bloodstream isolates at a South African academic healthcare facility.
    Diagn Microbiol Infect Dis. 2026;115:117373.
    PubMed         Abstract available

  17. ALI S, Burns K, Dinesh B, McDermott H, et al
    Is the pneumococcal urinary antigen test still fit for purpose? a decade of experience.
    Diagn Microbiol Infect Dis. 2026;115:117393.
    PubMed         Abstract available

  18. VASCONCELOS L, Goncalves I, da Silva GJ, Fernandes A, et al
    Community-acquired pulmonary infection caused by Bordetella hinzii: An under-recognized pathogen.
    Diagn Microbiol Infect Dis. 2026;115:117383.
    PubMed         Abstract available

  19. BLOCH J, Vissing N, Schmidt LS, Nielsen AY, et al
    Performance of a point-of-care test in the diagnosis of neuroborreliosis in children with peripheral facial palsy; a diagnostic accuracy study.
    Diagn Microbiol Infect Dis. 2026;115:117394.
    PubMed         Abstract available

  20. KOU D, He L, Jin Y, Li J, et al
    Successful treatment of pulmonary mucormycosis caused by Rhizopus arrhizus in a diabetic patient with combined bronchoscopic local and systemic antifungal therapy: A case report and literature review.
    Diagn Microbiol Infect Dis. 2026;115:117391.
    PubMed         Abstract available

  21. FREIRE MP, Sekiguchi WK, Gut TB, Torigoe CN, et al
    Should we screen for occult bacterial infection before kidney transplant? Balancing stewardship and patient safety.
    Diagn Microbiol Infect Dis. 2026;115:117389.
    PubMed         Abstract available

  22. ZACHARY M, Monica GP, Patrick K, Taisiya T, et al
    Capnocytophaga canimorsus peritonitis in a simultaneous liver-kidney transplant recipient: A case report and review of the literature.
    Diagn Microbiol Infect Dis. 2026;115:117396.
    PubMed         Abstract available


    Eur J Clin Microbiol Infect Dis

  23. BOSETTI D, Grant R, Chalot E, Abbas M, et al
    Mortality of CC398 Staphylococcus aureus bloodstream infections among hospitalised patients in a Swiss university hospital: a retrospective cohort study.
    Eur J Clin Microbiol Infect Dis. 2026 Apr 7. doi: 10.1007/s10096-026-05493.
    PubMed        

  24. OCIEPA T, Krolak A, Kluk H, Czyzewski K, et al
    Enterococcal bacteremia in children with malignancy or after hematopoietic stem cell transplantation: real-world multicenter data from a nationwide survey in Poland (2014-2021).
    Eur J Clin Microbiol Infect Dis. 2026 Apr 8. doi: 10.1007/s10096-026-05502.
    PubMed        

  25. ZHAN S, Pang K, Li X, Yang L, et al
    Contezolid in tuberculosis therapy: a retrospective analysis of real-world practice in China.
    Eur J Clin Microbiol Infect Dis. 2026 Apr 10. doi: 10.1007/s10096-026-05503.
    PubMed        


    J Antimicrob Chemother

  26. OLIVARES-NAVARRO P, Perez-Rodriguez MT, Sousa A, Goikoetxea-Agirre AJ, et al
    Mortality risk of ESBL producers in Escherichia coli bacteraemia: a comprehensive analysis using the PROBAC cohort.
    J Antimicrob Chemother. 2026;81:dkag130.
    PubMed         Abstract available

  27. OKANDA T, Nakajima N, Yamaguchi T, Koshikawa T, et al
    In vitro synergistic activity of minocycline and biapenem against cefiderocol-resistant New Delhi metallo-beta-lactamase-producing Enterobacterales.
    J Antimicrob Chemother. 2026;81:dkag128.
    PubMed         Abstract available

  28. AL-MIR H, Jeyakumar PZ, Kostyanev T, Khan FA, et al
    Insights from the WHO Tricycle-aligned Fleming Fund EQASIA External Quality Assessment (EQA) programme detecting ESBL-, AmpC- and carbapenemase-producing Escherichia coli in South and South-East Asia.
    J Antimicrob Chemother. 2026;81:dkag129.
    PubMed         Abstract available


    J Clin Microbiol

  29. BHUIYAN MTR, Liu J, Juma J, Horne B, et al
    Optimizing Shigella isolation: a multi-site evaluation of laboratory culture methods for Shigella detection, speciation, and serotyping with different transport media and sample types in the Enterics for Global Health study.
    J Clin Microbiol. 2026;64:e0127925.
    PubMed         Abstract available

  30. GU Y, Ibrahim BA, Gebremariam T, Alkhazraji S, et al
    Rapid and reliable diagnosis of mucormycosis using colorimetric loop-mediated isothermal amplification.
    J Clin Microbiol. 2026;64:e0179025.
    PubMed         Abstract available

  31. HASHIMOTO K, Fukushima K, Matsumoto Y, Saito H, et al
    Comparison of culture and culture-free methods for comprehensive identification of mycobacteria: a single-center prospective study.
    J Clin Microbiol. 2026;64:e0112825.
    PubMed         Abstract available

  32. LANDIVAR SM, Melli LJ, Pichel M, Rivas M, et al
    Serology as an early diagnostic tool in pediatric patients with Shiga toxin-producing Escherichia coli-associated hemolytic uremic syndrome: a post hoc analysis of a phase 2 clinical trial.
    J Clin Microbiol. 2026;64:e0141525.
    PubMed         Abstract available

  33. JEFFS MA, Chalmers G, Wong H, Sheth PM, et al
    resaCPE: a rapid, low-cost colorimetric assay for the detection of carbapenemase-producing Enterobacterales.
    J Clin Microbiol. 2026;64:e0100325.
    PubMed         Abstract available

  34. GREEN AL, Harris AD, Heller A, Vaeth E, et al
    Prevalence of Stenotrophomonas maltophilia colonization among patients receiving mechanical ventilation in long-term care facilities in Maryland, United States.
    J Clin Microbiol. 2026;64:e0162925.
    PubMed         Abstract available

  35. SIMNER PJ
    The shift from "MIC-Only" back to carbapenemase testing among carbapenem-resistant Enterobacterales: what clinical laboratories need to know about updated CLSI guidance.
    J Clin Microbiol. 2026 Mar 18:e0045125. doi: 10.1128/jcm.00451.
    PubMed         Abstract available

  36. NIELSEN MC, Ren P, Kavuri SB, Culbreath K, et al
    High-throughput multiplex detection of respiratory pathogens: multicenter evaluation of the NxTAG Respiratory Pathogen Panel v2 assay.
    J Clin Microbiol. 2026;64:e0174325.
    PubMed         Abstract available

  37. TOUATI A, Bercot B, Bebear C, Peuchant O, et al
    Evaluation of the UC-TIB-LGV assay for the genotyping of Chlamydia trachomatis in anorectal samples.
    J Clin Microbiol. 2026 Apr 9:e0006026. doi: 10.1128/jcm.00060.
    PubMed        


    J Infect Dis

  38. JEFFS MA, Li N, Ogunkoya O, Duncan DB, et al
    Cefazolin inoculum effect and cefazolin microbiological treatment failure in serious methicillin-susceptible Staphylococcus aureus infections: A multi-center retrospective cohort study.
    J Infect Dis. 2026 Apr 2:jiag199. doi: 10.1093.
    PubMed         Abstract available


    J Med Microbiol

  39. CHEN Z, Romero-Gonzalez M, Maser A, Leng R, et al
    Strain-specific persistence of Burkholderia cenocepacia in the C3HeB/FeJ mouse model of pulmonary infection.
    J Med Microbiol. 2026;75:002153.
    PubMed         Abstract available

  40. KHANIJAU A, Allman E, Pulmones R, Goodman RN, et al
    From colonization to invasion: genomic and phenotypic comparison of faecal and bloodstream isolates from the same patients.
    J Med Microbiol. 2026;75:002147.
    PubMed         Abstract available

  41. VANDERPOOL EJ, Rumbaugh KP
    A murine sinonasal infection model recapitulates key features of clinical chronic rhinosinusitis.
    J Med Microbiol. 2026;75:002152.
    PubMed         Abstract available

  42. KWON D, Williams P, Winter H
    Dynamic procalcitonin-guided antibiotic stewardship among cancer patients in the UK.
    J Med Microbiol. 2026;75:002145.
    PubMed         Abstract available


    JAMA

  43. ZAHID M, Danaee M, Siddiqi K
    Smoking Cessation Intervention for People With Tuberculosis-Reply.
    JAMA. 2026 Apr 8. doi: 10.1001/jama.2026.1275.
    PubMed        

  44. LIU Z, Peng L, Jiang M
    Smoking Cessation Intervention for People With Tuberculosis.
    JAMA. 2026 Apr 8. doi: 10.1001/jama.2026.1272.
    PubMed        


    MMWR Morb Mortal Wkly Rep

  45. LOGAN N, Birhane MG, McDonald SL, Alarcon J, et al
    Emergence of Extensively Drug-Resistant Shigellosis - United States, 2011-2023.
    MMWR Morb Mortal Wkly Rep. 2026;75:173-178.
    PubMed         Abstract available


    PLoS Med

  46. HORTON KC, Richards AS, Schwalb A, Houben RMGJ, et al
    Trade-offs in diagnostic algorithm, population coverage, and duration of community screening for tuberculosis: A modelling study.
    PLoS Med. 2026;23:e1005040.
    PubMed         Abstract available

  47. MORTAZAVI SA, Swartwood NA, Singh N, Can MH, et al
    Urban and rural prevalence of tuberculosis in low- and middle-income countries: A systematic review and meta-analysis.
    PLoS Med. 2026;23:e1004779.
    PubMed         Abstract available


    PLoS Negl Trop Dis

  48. QIN Q, Huang Y, Yang Z, Wei X, et al
    Long-term spatio-temporal trends in burden of fungal skin diseases in middle-aged and elderly people from 1990 to 2021.
    PLoS Negl Trop Dis. 2026;20:e0014157.
    PubMed         Abstract available

  49. LIU Y, Ge J, Song G, Gao P, et al
    Impact of inactivation methods on biosafety and antigen reactivity of Brucella melitensis from the perspective of Astral-DIA proteomics based on antibody immunoprecipitation mass spectrometry.
    PLoS Negl Trop Dis. 2026;20:e0013397.
    PubMed         Abstract available


    PLoS One


  50. Editorial Note: DNA persistence and relapses questions on the treatment strategies of Enterococcus infections of prosthetic valves.
    PLoS One. 2026;21:e0346848.
    PubMed        

  51. DOS SANTOS DF, Carvalho IR, Borges IS, Alves PHSC, et al
    Leprosy neuropathy and demyelinating impairment: How should we interpret this neurophysiological pattern?
    PLoS One. 2026;21:e0343962.
    PubMed         Abstract available

  52. SAHIN S, Celil Ozaslan BG, Mogulkoc MN, Karadag M, et al
    Antimicrobial resistance profiles and whole-genome sequence analysis of extended-spectrum beta-lactamase (ESBL) production in commensal Escherichia coli from poultry in Turkiye.
    PLoS One. 2026;21:e0344717.
    PubMed         Abstract available

  53. SHUVO MN, Al Arian T, Fuad F, Noman MH, et al
    Computational and immunoinformatics approaches for designing phytocompound-based drugs and a multi-epitope vaccine targeting FemA, a cell wall protein of Staphylococcus aureus.
    PLoS One. 2026;21:e0346271.
    PubMed         Abstract available

  54. NLULA JA, Samita S, Jam EY, Ngowi B, et al
    Determinants of tuberculosis presentation and successful treatment outcome among tuberculosis patients in Geita, Tanzania.
    PLoS One. 2026;21:e0346249.
    PubMed         Abstract available

  55. DONG Z, Mu X, Du W, An Z, et al
    Trends and correlations of infection rates and drug resistance of Escherichia coli among ICU and Non-ICU patients in Guizhou, China.
    PLoS One. 2026;21:e0346023.
    PubMed         Abstract available

  56. MAPIPO M, Maleti A, Mwansa P, Daka P, et al
    The burden and correlates of bloodborne pathogens in a Zambian Blood Donor Cohort.
    PLoS One. 2026;21:e0346680.
    PubMed         Abstract available


    PLoS Pathog

  57. KAVALIAUSKAS P, Risteen R, Alkhazraji S, Shirtliff B, et al
    Integrin ss4 is a receptor for emerging fungal pathogens from the genera Lomentospora and Scedosporium.
    PLoS Pathog. 2026;22:e1014107.
    PubMed         Abstract available

  58. HOMMES JW, Hughes ME, Cheung D, Petri B, et al
    Adeno-associated virus delivery of anti-alpha toxin monoclonal antibodies confers protection against Staphylococcus aureus infections.
    PLoS Pathog. 2026;22:e1014090.
    PubMed         Abstract available

  59. NISSAN M, Ranger A, Meade JJ, Gillmore V, et al
    Host response to bacteria induces a shift towards the enteroendocrine cell lineage in the murine enteroid model.
    PLoS Pathog. 2026;22:e1014069.
    PubMed         Abstract available


    Proc Natl Acad Sci U S A

  60. GARO LP, Brueck K, Walachowski S, Jayaraman A, et al
    Proton-activated chloride channel 1 is essential for innate host defense against bacterial sepsis.
    Proc Natl Acad Sci U S A. 2026;123:e2515768123.
    PubMed         Abstract available


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