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Articles published in PLoS Comput Biol

Retrieve available abstracts of 31 articles:
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Single Articles


    April 2022
  1. WEERASURIYA CK, Harris RC, McQuaid CF, Gomez GB, et al
    Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination.
    PLoS Comput Biol. 2022;18:e1010002.
    PubMed     Abstract available


  2. SAEIDPOUR A, Bansal S, Rohani P
    Dissecting recurrent waves of pertussis across the boroughs of London.
    PLoS Comput Biol. 2022;18:e1009898.
    PubMed     Abstract available


    March 2022
  3. GODIJK NG, Bootsma MCJ, van Werkhoven HC, Schweitzer VA, et al
    Does plasmid-based beta-lactam resistance increase E. coli infections: Modelling addition and replacement mechanisms.
    PLoS Comput Biol. 2022;18:e1009875.
    PubMed     Abstract available


    February 2022
  4. WANG S, Reeve SM, Holt GT, Ojewole AA, et al
    Chiral evasion and stereospecific antifolate resistance in Staphylococcus aureus.
    PLoS Comput Biol. 2022;18:e1009855.
    PubMed     Abstract available


  5. YAESOUBI R, Cohen T, Hsu K, Gift TL, et al
    Evaluating spatially adaptive guidelines for the treatment of gonorrhea to reduce the incidence of gonococcal infection and increase the effective lifespan of antibiotics.
    PLoS Comput Biol. 2022;18:e1009842.
    PubMed     Abstract available


  6. LOCHEN A, Truscott JE, Croucher NJ
    Analysing pneumococcal invasiveness using Bayesian models of pathogen progression rates.
    PLoS Comput Biol. 2022;18:e1009389.
    PubMed     Abstract available


    December 2021
  7. EWALD J, Rivieccio F, Radosa L, Schuster S, et al
    Dynamic optimization reveals alveolar epithelial cells as key mediators of host defense in invasive aspergillosis.
    PLoS Comput Biol. 2021;17:e1009645.
    PubMed     Abstract available


  8. SAH P, Otterstatter M, Leu ST, Leviyang S, et al
    Revealing mechanisms of infectious disease spread through empirical contact networks.
    PLoS Comput Biol. 2021;17:e1009604.
    PubMed     Abstract available


    November 2021
  9. DUAN Q, Carmody C, Donovan B, Guy RJ, et al
    Modelling response strategies for controlling gonorrhoea outbreaks in men who have sex with men in Australia.
    PLoS Comput Biol. 2021;17:e1009385.
    PubMed     Abstract available


    October 2021
  10. BALAKRISHNA S, Salazar-Vizcaya L, Schmidt AJ, Kachalov V, et al
    Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study.
    PLoS Comput Biol. 2021;17:e1009529.
    PubMed     Abstract available


    September 2021
  11. GOSCE L, Abou Jaoude GJ, Kedziora DJ, Benedikt C, et al
    Optima TB: A tool to help optimally allocate tuberculosis spending.
    PLoS Comput Biol. 2021;17:e1009255.
    PubMed     Abstract available


  12. CALLAN T, Woodcock S, Huston WM
    Ascension of Chlamydia is moderated by uterine peristalsis and the neutrophil response to infection.
    PLoS Comput Biol. 2021;17:e1009365.
    PubMed     Abstract available


    July 2021
  13. LLOYD T, Steigler P, Mpande CAM, Rozot V, et al
    Multidimensional analysis of immune responses identified biomarkers of recent Mycobacterium tuberculosis infection.
    PLoS Comput Biol. 2021;17:e1009197.
    PubMed     Abstract available


  14. NOROY C, Meyer DF
    The super repertoire of type IV effectors in the pangenome of Ehrlichia spp. provides insights into host-specificity and pathogenesis.
    PLoS Comput Biol. 2021;17:e1008788.
    PubMed     Abstract available


    June 2021
  15. ESENER N, Guerra AM, Giebel K, Lea D, et al
    Mass spectrometry and machine learning for the accurate diagnosis of benzylpenicillin and multidrug resistance of Staphylococcus aureus in bovine mastitis.
    PLoS Comput Biol. 2021;17:e1009108.
    PubMed     Abstract available


  16. GONCALVES BP, Procter SR, Clifford S, Koukounari A, et al
    Estimation of country-level incidence of early-onset invasive Group B Streptococcus disease in infants using Bayesian methods.
    PLoS Comput Biol. 2021;17:e1009001.
    PubMed     Abstract available


  17. O'HARE A, Balaz D, Wright DM, McCormick C, et al
    A new phylodynamic model of Mycobacterium bovis transmission in a multi-host system uncovers the role of the unobserved reservoir.
    PLoS Comput Biol. 2021;17:e1009005.
    PubMed     Abstract available


  18. SANDHU SK, Bayliss CD, Morozov AY
    How does feedback from phage infections influence the evolution of phase variation in Campylobacter?
    PLoS Comput Biol. 2021;17:e1009067.
    PubMed     Abstract available


    March 2021
  19. WOOTEN DJ, Zanudo JGT, Murrugarra D, Perry AM, et al
    Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies.
    PLoS Comput Biol. 2021;17:e1008690.
    PubMed     Abstract available


  20. GUYEUX C, Sola C, Nous C, Refregier G, et al
    CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA.
    PLoS Comput Biol. 2021;17:e1008500.
    PubMed     Abstract available


    February 2021
  21. HAVUMAKI J, Cohen T, Zhai C, Miller JC, et al
    Protective impacts of household-based tuberculosis contact tracing are robust across endemic incidence levels and community contact patterns.
    PLoS Comput Biol. 2021;17:e1008713.
    PubMed     Abstract available


  22. HENSON MA
    Computational modeling of the gut microbiota reveals putative metabolic mechanisms of recurrent Clostridioides difficile infection.
    PLoS Comput Biol. 2021;17:e1008782.
    PubMed     Abstract available


    January 2021
  23. KHAKZAD H, Happonen L, Karami Y, Chowdhury S, et al
    Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology.
    PLoS Comput Biol. 2021;17:e1008169.
    PubMed     Abstract available


  24. KACHALOV VN, Nguyen H, Balakrishna S, Salazar-Vizcaya L, et al
    Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level.
    PLoS Comput Biol. 2021;17:e1008446.
    PubMed     Abstract available


  25. LI J, Manitz J, Bertuzzo E, Kolaczyk ED, et al
    Sensor-based localization of epidemic sources on human mobility networks.
    PLoS Comput Biol. 2021;17:e1008545.
    PubMed     Abstract available


  26. EYRE DW, Laager M, Walker AS, Cooper BS, et al
    Probabilistic transmission models incorporating sequencing data for healthcare-associated Clostridioides difficile outperform heuristic rules and identify strain-specific differences in transmission.
    PLoS Comput Biol. 2021;17:e1008417.
    PubMed     Abstract available


    December 2020
  27. EVANS S, Butler JR, Mattila JT, Kirschner DE, et al
    Systems biology predicts that fibrosis in tuberculous granulomas may arise through macrophage-to-myofibroblast transformation.
    PLoS Comput Biol. 2020;16:e1008520.
    PubMed     Abstract available


  28. LIBISELLER-EGGER J, Phelan J, Campino S, Mohareb F, et al
    Robust detection of point mutations involved in multidrug-resistant Mycobacterium tuberculosis in the presence of co-occurrent resistance markers.
    PLoS Comput Biol. 2020;16:e1008518.
    PubMed     Abstract available


    October 2020
  29. CLIFF OM, McLean N, Sintchenko V, Fair KM, et al
    Inferring evolutionary pathways and directed genotype networks of foodborne pathogens.
    PLoS Comput Biol. 2020;16:e1008401.
    PubMed     Abstract available


  30. LYDEAMORE MJ, Campbell PT, Price DJ, Wu Y, et al
    Estimation of the force of infection and infectious period of skin sores in remote Australian communities using interval-censored data.
    PLoS Comput Biol. 2020;16:e1007838.
    PubMed     Abstract available


    August 2020
  31. HOYLE A, Cairns D, Paterson I, McMillan S, et al
    Optimising efficacy of antibiotics against systemic infection by varying dosage quantities and times.
    PLoS Comput Biol. 2020;16:e1008037.
    PubMed     Abstract available


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