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HIV Infection

Free Subscription Articles published in PLoS Comput Biol Retrieve available abstracts of 12 articles: HTML format

Single Articles

February 2025
1. TESLYA A, Heijne JCM, van der Loeff MFS, van Sighem A, et al
   Impact of increased diagnosis of early HIV infection and immediate antiretroviral treatment initiation on HIV transmission among men who have sex with men in the Netherlands.
   PLoS Comput Biol. 2025;21:e1012055.
   PubMed     Abstract available
   
   
   
2. BANHOLZER N, Middelkoop K, Leukes J, Weingartner E, et al
   Estimating Mycobacterium tuberculosis transmission in a South African clinic: Spatiotemporal model based on person movements.
   PLoS Comput Biol. 2025;21:e1012823.
   PubMed     Abstract available
   
   
   December 2024
3. ABRAHAM AA, Tan ZC, Shrestha P, Bozich ER, et al
   A multivalent binding model infers antibody Fc species from systems serology.
   PLoS Comput Biol. 2024;20:e1012663.
   PubMed     Abstract available
   
   
   November 2024
4. IGIRANEZA AB, Zacharopoulou P, Hinch R, Wymant C, et al
   Learning patterns of HIV-1 resistance to broadly neutralizing antibodies with reduced subtype bias using multi-task learning.
   PLoS Comput Biol. 2024;20:e1012618.
   PubMed     Abstract available
   
   
   September 2024
5. VEMPARALA B, Madelain V, Passaes C, Millet A, et al
   Antiviral capacity of the early CD8 T-cell response is predictive of natural control of SIV infection: Learning in vivo dynamics using ex vivo data.
   PLoS Comput Biol. 2024;20:e1012434.
   PubMed     Abstract available
   
   
   July 2024
6. TATARA E, Lin Q, Ozik J, Kolak M, et al
   Spatial inequities in access to medications for treatment of opioid use disorder highlight scarcity of methadone providers under counterfactual scenarios.
   PLoS Comput Biol. 2024;20:e1012307.
   PubMed     Abstract available
   
   
   June 2024
7. ADOLF-BRYFOGLE J, Labonte JW, Kraft JC, Shapovalov M, et al
   Growing Glycans in Rosetta: Accurate de novo glycan modeling, density fitting, and rational sequon design.
   PLoS Comput Biol. 2024;20:e1011895.
   PubMed     Abstract available
   
   
   
8. MAINOU E, Ribeiro RM, Conway JM
   Modeling dynamics of acute HIV infection incorporating density-dependent cell death and multiplicity of infection.
   PLoS Comput Biol. 2024;20:e1012129.
   PubMed     Abstract available
   
   
   April 2024
9. ZITZMANN C, Ke R, Ribeiro RM, Perelson AS, et al
   How robust are estimates of key parameters in standard viral dynamic models?
   PLoS Comput Biol. 2024;20:e1011437.
   PubMed     Abstract available
   
   
   
10. SUN C, Fang R, Salemi M, Prosperi M, et al
    DeepDynaForecast: Phylogenetic-informed graph deep learning for epidemic transmission dynamic prediction.
    PLoS Comput Biol. 2024;20:e1011351.
    PubMed     Abstract available
    
    
    March 2024
11. SHAO Y, Magee AF, Vasylyeva TI, Suchard MA, et al
    Scalable gradients enable Hamiltonian Monte Carlo sampling for phylodynamic inference under episodic birth-death-sampling models.
    PLoS Comput Biol. 2024;20:e1011640.
    PubMed     Abstract available
    
    
    
12. CASSIDY T, Stephenson KE, Barouch DH, Perelson AS, et al
    Modeling resistance to the broadly neutralizing antibody PGT121 in people living with HIV-1.
    PLoS Comput Biol. 2024;20:e1011518.
    PubMed     Abstract available
    
    

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