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  Genetics

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Articles published in PLoS One

Retrieve available abstracts of 545 articles:
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Single Articles


    January 2025
  1. MAHAMAN MOURTALA IZ, Gouda AC, Baina DJ, Maxwell NII, et al
    Genetic diversity and population structure studies of West African sweetpotato [Ipomoea batatas (L.) Lam] collection using DArTseq.
    PLoS One. 2025;20:e0312384.
    PubMed     Abstract available


  2. REED LK, Kleinschmit AJ, Buonaccorsi V, Hunt AG, et al
    A genomics learning framework for undergraduates.
    PLoS One. 2025;20:e0313124.
    PubMed     Abstract available


  3. PERVEEN A, Sheheryar S, Ahmad F, Mustafa G, et al
    Integrative physiological, biochemical, and proteomic analysis of the leaves of two cotton genotypes under heat stress.
    PLoS One. 2025;20:e0316630.
    PubMed     Abstract available


  4. GUARNIERO I, Stancampiano L, Franch R, Armaroli E, et al
    Genetic variability and population structure analysis of Protostrongylus oryctolagi (Nematoda: Protostrongylidae) in Lepus europaeus from Central and Northern Italy.
    PLoS One. 2025;20:e0313998.
    PubMed     Abstract available


  5. TREJO-SALAZAR RE, Gasca-Pineda J, Hernandez-Bolanos K, Hernandez-Rosales DC, et al
    High genetic variation, low differentiation, and Pleistocene expansions of the migratory and endangered long-nosed tequila bat, Leptonycteris nivalis, inferred using both maternal and paternal genetic markers.
    PLoS One. 2025;20:e0316530.
    PubMed     Abstract available


  6. TAL O, Zahavi T, Sinberger LA, Salmon-Divon M, et al
    Unlocking prognostic potential: A genomic signature of caloric restriction in patients with epithelial ovarian cancer.
    PLoS One. 2025;20:e0317502.
    PubMed     Abstract available


  7. PATIL A, Vidhate P, Patil S, Rao A, et al
    Looking back into the Hepatitis C Virus epidemic dynamics from Unnao, India through phylogenetic approach.
    PLoS One. 2025;20:e0317705.
    PubMed     Abstract available


  8. AO Y, Lan Q, Yu T, Wang Z, et al
    Cellular senescence-associated genes in rheumatoid arthritis: Identification and functional analysis.
    PLoS One. 2025;20:e0317364.
    PubMed     Abstract available


  9. CHAHARLASHKAR Z, Saeedi Honar Y, Abdollahpour-Alitappeh M, Parvizpour S, et al
    Metastatic melanoma: An integrated analysis to identify critical regulators associated with prognosis, pathogenesis and targeted therapies.
    PLoS One. 2025;20:e0312754.
    PubMed     Abstract available


  10. HOHAN R, Surleac M, Miron VD, Tudor A, et al
    Ongoing measles outbreak in Romania: Clinical investigation and molecular epidemiology performed on whole genome sequences.
    PLoS One. 2025;20:e0317045.
    PubMed     Abstract available


  11. GERMITSCH N, Kockmann T, Schnyder M, Tritten L, et al
    N-terminomics profiling of host proteins targeted by excretory-secretory proteases of the nematode Angiostrongylus vasorum identifies points of interaction with canine coagulation and complement cascade.
    PLoS One. 2025;20:e0316217.
    PubMed     Abstract available


  12. JABBAR MH, Atif FA, Kashif M, Ahmed I, et al
    Molecular epidemiology and phylogenetic insights of lumpy skin disease in cattle from diverse agro-ecological regions of Punjab, Pakistan.
    PLoS One. 2025;20:e0315532.
    PubMed     Abstract available


  13. XU M, Yuan S, Luo X, Xu M, et al
    Construction of an lncRNA-mediated ceRNA network to investigate the inflammatory regulatory mechanisms of ischemic stroke.
    PLoS One. 2025;20:e0317710.
    PubMed     Abstract available


  14. LI H, Zhang L, Han X, Zhang Q, et al
    Tandem mass tag-based quantitative proteomics and targeted hormone analysis reveal the response to insect herbivory stress in Ginseng (Panax ginseng, L.).
    PLoS One. 2025;20:e0316032.
    PubMed     Abstract available


  15. SUMMER K, Guo Q, Liu L, Barkla B, et al
    Antimicrobial proteins from oyster hemolymph improve the efficacy of conventional antibiotics.
    PLoS One. 2025;20:e0312305.
    PubMed     Abstract available


  16. MUKHEBI DW, Gachanja PW, Karan DJ, Kamau BM, et al
    DArTseq-based silicoDArT and SNP markers reveal the genetic diversity and population structure of Kenyan cashew (Anacardium occidentale L.) landraces.
    PLoS One. 2025;20:e0313850.
    PubMed     Abstract available


  17. SILVA ACD, Gregorio da Silva DC, Ferreira EGC, Abdelnoor RV, et al
    Genetic diversity, population structure in a historical panel of Brazilian soybean cultivars.
    PLoS One. 2025;20:e0313151.
    PubMed     Abstract available


  18. ECHANIZ-AVILES G, Nunez-Garcia LA, Rodriguez-Noriega E, Velazquez-Acosta C, et al
    Genomic characteristics and molecular epidemiology of MRSA from medical centers in Mexico: Results from the Invifar network.
    PLoS One. 2025;20:e0317284.
    PubMed     Abstract available


  19. TAOKA M, Kuwana R, Murakami Y, Kashima A, et al
    The ionic liquid-assisted sample preparation method pTRUST allows sensitive proteome characterization of a variety of bacterial endospores to aid in the search for protein biomarkers.
    PLoS One. 2025;20:e0318186.
    PubMed     Abstract available


  20. GUNUNDU R, Shimelis H, Tesfamariam SA
    Genetic diversity and population structure analyses of tropical maize inbred lines using Single Nucleotide Polymorphism markers.
    PLoS One. 2025;20:e0315463.
    PubMed     Abstract available


  21. HICKMAN E, Carberry V, Carberry C, Cooper B, et al
    Respiratory extracellular vesicle isolation optimization through proteomic profiling of equine samples and identification of candidates for cell-of-origin studies.
    PLoS One. 2025;20:e0315743.
    PubMed     Abstract available


  22. SUNMONU GT, Adzitey F, Odih EE, Tibile BA, et al
    Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality Ghana.
    PLoS One. 2025;20:e0315583.
    PubMed     Abstract available


  23. QIU LX, Yu Q, Zhou HQ, Fan WH, et al
    TMT-based quantitative proteomics reveals the genetic mechanisms of secondary hair follicle development in fine-wool sheep.
    PLoS One. 2025;20:e0315637.
    PubMed     Abstract available


  24. NAZ H, Timotheous R, Sarwar MF, Nadeem T, et al
    Utilizing the subtractive proteomics approach to design ensemble vaccine against Candida lusitaniae for immune response stimulation; a bioinformatics study.
    PLoS One. 2025;20:e0316264.
    PubMed     Abstract available


  25. KUCZYNSKA A, Michalek M, Ogrodowicz P, Kempa M, et al
    Disorders in brassinosteroids signal transduction triggers the profound molecular alterations in the crown tissue of barley under drought.
    PLoS One. 2025;20:e0318281.
    PubMed     Abstract available


  26. CORTES-HERNANDEZ JG, Garcia-Ruiz A, Penagaricano F, Montaldo HH, et al
    Uncovering the genetic basis of milk production traits in Mexican Holstein cattle based on individual markers and genomic windows.
    PLoS One. 2025;20:e0314888.
    PubMed     Abstract available


  27. MILES LS, Carlen EJ, Nassrullah Z, Munshi-South J, et al
    No detectable effect of urbanization on genetic drift or gene flow in specialist herbivorous insects of milkweed.
    PLoS One. 2025;20:e0318956.
    PubMed     Abstract available


  28. LI Q, Wu X, Niu X, Yu Z, et al
    Integrated metagenomic and metabolomic analyses of the effects of total flavonoids of Rhizoma Drynariae on reducing ovariectomized-induced osteoporosis by regulating gut microbiota and related metabolites.
    PLoS One. 2025;20:e0317832.
    PubMed     Abstract available


  29. REISS RA, Guerra PA, Makhnin O, Kellom M, et al
    Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site.
    PLoS One. 2025;20:e0306503.
    PubMed     Abstract available


  30. LEE YB, So S, Park YJ, Kang H, et al
    Genetic diversity and population structure analysis of Forsythia ovata, a Korean endemic, based on genotyping-by-sequencing.
    PLoS One. 2025;20:e0317278.
    PubMed     Abstract available


  31. KAMINER ABARGEL M, Macarov M, Hendler K, Yahalom C, et al
    The importance of genetic counselling and testing in inherited eye diseases: A population-based retrospective study.
    PLoS One. 2025;20:e0318492.
    PubMed     Abstract available


  32. SCAKETTI M, Sujii PS, Alves-Pereira A, Schwarcz KD, et al
    Sample Size Impact (SaSii): An R script for estimating optimal sample sizes in population genetics and population genomics studies.
    PLoS One. 2025;20:e0316634.
    PubMed     Abstract available


  33. PONGSANARM T, Panthum T, Budi T, Wongloet W, et al
    Genetic and geographical insights call for early conservation of Mae Hong Son's blue mahseer to prevent population crisis.
    PLoS One. 2025;20:e0313505.
    PubMed     Abstract available


  34. HONDA K, Kajino A, Tsutsumi T
    Comparative genomic profiling of SLC26A4-expressing cells in the inner ear and other organs.
    PLoS One. 2025;20:e0318972.
    PubMed     Abstract available


  35. LIAN K, Chen Z, Chen L, Li Y, et al
    Network study of miRNA regulating traumatic heterotopic ossification.
    PLoS One. 2025;20:e0318779.
    PubMed     Abstract available


  36. ZHANG Z, Zhu Y, Zhang J, He W, et al
    Identification of novel proteins associated with intelligence by integrating genome-wide association data and human brain proteomics.
    PLoS One. 2025;20:e0319278.
    PubMed     Abstract available


  37. JANSEN JA, Manukyan A, Al Khoury N, Akalin A, et al
    Leveraging large language models for data analysis automation.
    PLoS One. 2025;20:e0317084.
    PubMed     Abstract available


  38. CHEN C, Khanthiyong B, Thaweetee-Sukjai B, Charoenlappanit S, et al
    Proteomic associations with cognitive variability as measured by the Wisconsin Card Sorting Test in a healthy Thai population: A machine learning approach.
    PLoS One. 2025;20:e0313365.
    PubMed     Abstract available


  39. LI J, Tao L, Zhou Y, Zhu Y, et al
    Identification of biomarkers in Alzheimer's disease and COVID-19 by bioinformatics combining single-cell data analysis and machine learning algorithms.
    PLoS One. 2025;20:e0317915.
    PubMed     Abstract available


  40. ZENG X, Xing YH, Ma XM, Long Y, et al
    Proteomic and metabolomic profiling reveals the underlying molecular mechanisms in modified alternate-day fasting-mediated protection against Diabetic kidney disease.
    PLoS One. 2025;20:e0319053.
    PubMed     Abstract available


  41. MUKITI HM, Badu-Apraku B, Abe A, Adejumobi II, et al
    Optimizing breeding strategies for early-maturing white maize through genetic diversity and population structure.
    PLoS One. 2025;20:e0316793.
    PubMed     Abstract available


  42. SHIN HY, Park JH, Cha KC, Kim HJ, et al
    Exploratory study of serum protein biomarkers for sudden cardiac arrest using protein extension assay: A case-control study.
    PLoS One. 2025;20:e0319466.
    PubMed     Abstract available


  43. BURRIEL-CARRANZA B, Koppetsch T, Tabares J, Talavera A, et al
    Cryptic speciation in arid mountains: An integrative revision of the Pristurus rupestris species complex (Squamata, Sphaerodactylidae) from Arabia based on morphological, genetic and genomic data, with the description of four new species.
    PLoS One. 2025;20:e0315000.
    PubMed     Abstract available


  44. TEKLEWOLD TH, Bogale TG, Tseganeh DG, Birara ME, et al
    Genetic diversity and population structure of Ethiopian Sweet Sorghum [Sorghum bicolor (L.) Moench] germplasms using SSR markers.
    PLoS One. 2025;20:e0316549.
    PubMed     Abstract available


  45. HUNG LH, Fukuda B, Schmitz R, Hoang V, et al
    Harmonizing and integrating the NCI Genomic Data Commons through accessible, interactive, and cloud-enabled workflows.
    PLoS One. 2025;20:e0318676.
    PubMed     Abstract available


  46. VAGIONA AC, Notopoulou S, Zdrahal Z, Goncalves-Kulik M, et al
    Prediction of protein interactions with function in protein (de-)phosphorylation.
    PLoS One. 2025;20:e0319084.
    PubMed     Abstract available


  47. RIAZ R, Khan K, Aghayeva S, Uddin R, et al
    Combatting antibiotic resistance in Gardnerella vaginalis: A comparative in silico investigation for drug target identification.
    PLoS One. 2025;20:e0314465.
    PubMed     Abstract available


  48. NICHOLAS B, Bailey A, McCann KJ, Walker RC, et al
    Comparative analysis of protein expression between oesophageal adenocarcinoma and normal adjacent tissue.
    PLoS One. 2025;20:e0318572.
    PubMed     Abstract available


  49. TOKER TP, Ulusoy D, Dogan B, Kasapoglu S, et al
    Genomic insights into Mediterranean pepper diversity using ddRADSeq.
    PLoS One. 2025;20:e0318105.
    PubMed     Abstract available


  50. TAO Y, Gao C, Wang J, Zhang Q, et al
    Analysis of cellular senescence-related genes in calcified aortic valve disease and the potential therapeutic role of beta-Carotene.
    PLoS One. 2025;20:e0318574.
    PubMed     Abstract available


  51. STRILLACCI MG, Ferrulli V, Bernini F, Pravettoni D, et al
    Genomic analysis of bovine respiratory disease resistance in preweaned dairy calves diagnosed by a combination of clinical signs and thoracic ultrasonography.
    PLoS One. 2025;20:e0318520.
    PubMed     Abstract available


  52. ABADURA NS, Abebe AT, Rabbi IY, Beyene TM, et al
    DArTSNP based genetic diversity analyses in cassava (Manihote esculenta [Cranz]) genotypes sourced from different regions revealed high level of diversity within population.
    PLoS One. 2025;20:e0308027.
    PubMed     Abstract available


  53. BABAEI S, Varkey DA, Adamack AT, LeBlanc NM, et al
    Genome-wide SNPs reveal novel genetic relationships among Atlantic cod (Gadus morhua) from the south coast of Newfoundland, Canada (subdivision 3Ps), Northern cod stock complex, and Gulf of St Lawrence.
    PLoS One. 2025;20:e0317768.
    PubMed     Abstract available


  54. SADONES O, Kramarska E, Sainz-Mejias M, Berisio R, et al
    Identification of cross-reactive vaccine antigen candidates in Gram-positive ESKAPE pathogens through subtractive proteome analysis using opsonic sera.
    PLoS One. 2025;20:e0319933.
    PubMed     Abstract available


  55. EL KHOURY P, Zeidan A, Khalaf RA
    Proteomic characterization of clinical Candida glabrata isolates with varying degrees of virulence and resistance to fluconazole.
    PLoS One. 2025;20:e0320484.
    PubMed     Abstract available


  56. MAHMUD S, Ajadee A, Sarker A, Ahmmed R, et al
    Exploring common genomic biomarkers to disclose common drugs for the treatment of colorectal cancer and hepatocellular carcinoma with type-2 diabetes through transcriptomics analysis.
    PLoS One. 2025;20:e0319028.
    PubMed     Abstract available


  57. KITAMOTO T, Kitamoto A
    Integrative proteomic and lipidomic analysis of GNB1 and SCARB2 knockdown in human subcutaneous adipocytes.
    PLoS One. 2025;20:e0319163.
    PubMed     Abstract available


  58. KHAN SA
    Network pharmacology and in silico analysis reveal Kochiae Fructus as a potential therapeutic against atopic dermatitis through immunomodulatory pathway interactions.
    PLoS One. 2025;20:e0320818.
    PubMed     Abstract available


  59. LUO R, Liang Z, Chen H, Bao D, et al
    Potential diagnostic markers and therapeutic targets for DM2 and periodontitis based on bioinformatics analysis.
    PLoS One. 2025;20:e0320061.
    PubMed     Abstract available


  60. BRANGSCH H, Marcordes S, Busch A, Weber M, et al
    Comparative genomics of Mycobacterium avium subsp. hominissuis strains within a group of captive lowland tapirs.
    PLoS One. 2025;20:e0320499.
    PubMed     Abstract available


  61. YUN H, Seo JH, Kim YK, Yang J, et al
    Examining the bacterial diversity including extracellular vesicles in air and soil: implications for human health.
    PLoS One. 2025;20:e0320916.
    PubMed     Abstract available


  62. PEREZ AE, Hernandez-Montelongo J, Flores MG, Rodriguez ME, et al
    Revealing the ancient origins of blonde beers: Phylogeography and phylogenetics of cryotolerant fermentative yeast Saccharomyces eubayanus from pre-Hispanic pottery in Northwestern Patagonia, Argentina.
    PLoS One. 2025;20:e0319938.
    PubMed     Abstract available


  63. EL SHAMIEH S, Saleem RA, Hammoudi Halat D, Fakhoury HMA, et al
    Integrating pharmacogenomics in three Middle Eastern countries' healthcare (Lebanon, Qatar, and Saudi Arabia): Current insights, challenges, and strategic directions.
    PLoS One. 2025;20:e0319042.
    PubMed     Abstract available


  64. WANG Y, Wang Z, Pan J, Wang H, et al
    Reconstruction of the lncRNA-miRNA-mRNA network based on competitive endogenous RNA reveals functional miRNAs and lncRNAs in burns and keloids.
    PLoS One. 2025;20:e0320855.
    PubMed     Abstract available


  65. JAGADESAN S, Guda C
    MetaDAVis: An R shiny application for metagenomic data analysis and visualization.
    PLoS One. 2025;20:e0319949.
    PubMed     Abstract available


  66. SU Z, Ling Z, Chen H, Hu L, et al
    Association between hyperlipidemia and nephrolithiasis: A comprehensive bioinformatics analysis deciphering the potential common denominator pathogenesis.
    PLoS One. 2025;20:e0321734.
    PubMed     Abstract available


  67. LAWSON LP, Bittencourt-Silva GB, Conradie W, Portik DM, et al
    A phylogenomic perspective reveals mitochondrial-nuclear discordance and previously undescribed species nested within a widespread East African Reed frog species (Hyperolius substriatus Ahl, 1931).
    PLoS One. 2025;20:e0318951.
    PubMed     Abstract available


  68. HONG E, Kim HC, Lee JH, Jeong W, et al
    Genetic diversity of Olive flounder (Paralichthys olivaceus) and the impact of selective breeding on Korean populations.
    PLoS One. 2025;20:e0318672.
    PubMed     Abstract available


  69. ZHA C, Huang A, Kailasam S, Young D, et al
    Identifying putative substrates of Calpain-15 in neurodevelopment.
    PLoS One. 2025;20:e0319489.
    PubMed     Abstract available


  70. XIONG J, Zhang L, Xing J, Huang W, et al
    Evaluation and Characterization of Acute respiratory distress syndrome in tree shrews through TMT proteomic method.
    PLoS One. 2025;20:e0319752.
    PubMed     Abstract available


  71. DA SILVA-ALVAREZ E, Gomez-Arrones V, Correa-Fiz F, Martin-Cano FE, et al
    Metagenomic and proteomic analyses reveal similar reproductive microbial profiles and shared functional pathways in uterine immune regulation in mares and jennies.
    PLoS One. 2025;20:e0321389.
    PubMed     Abstract available


  72. CURATOLO M, Chiu AP, Chia C, Ward A, et al
    Multi-omics profiles of chronic low back pain and fibromyalgia-Study protocol.
    PLoS One. 2025;20:e0312061.
    PubMed     Abstract available


  73. SZARMACH SJ, Teeter KC, M'soka J, Droge E, et al
    Genetic diversity and demographic history of the largest remaining migratory population of brindled wildebeest (Connochaetes taurinus taurinus) in southern Africa.
    PLoS One. 2025;20:e0310580.
    PubMed     Abstract available


  74. ALNAIMAT SM, Abushattal S, Dmour SM, Al-Awaida WJ, et al
    Genomic insights into the taxonomic status and bioactive gene cluster profiling of Bacillus velezensis RVMD2 isolated from desert rock varnish in Ma'an, Jordan.
    PLoS One. 2025;20:e0319345.
    PubMed     Abstract available


  75. LAMMERT DB, Fernandez RF, Liu X, Chen J, et al
    Proteomic analysis of hippocampus reveals metabolic reprogramming in a piglet model of mild hypoxic ischemic encephalopathy.
    PLoS One. 2025;20:e0320869.
    PubMed     Abstract available


  76. HERNANDEZ-VALENCIA JC, Gomez GF, Correa MM
    Metagenomic analysis evidences a core virome in Anopheles darlingi from three contrasting Colombian ecoregions.
    PLoS One. 2025;20:e0320593.
    PubMed     Abstract available


  77. CHEN C, Bao M, Zeng Y, Wang X, et al
    Proteomic analysis of oat (Avena sativa L.) under drought stress using tandem mass tag labeling.
    PLoS One. 2025;20:e0322022.
    PubMed     Abstract available


  78. ALDA F, Mendoza-Franco EF, Hanson-Regan W, Reina RG, et al
    Geography is a stronger predictor of diversification of monogenean parasites (Platyhelminthes) than host relatedness in characin fishes of Middle America.
    PLoS One. 2025;20:e0316974.
    PubMed     Abstract available


  79. LEVIN Y, Tickotsky N, Morgenstern D, Wolf-Levy H, et al
    Cognitive decline in older adults with type 2 diabetes: Unraveling site-specific glycoproteomic alterations.
    PLoS One. 2025;20:e0318916.
    PubMed     Abstract available


  80. COLIN R, Aguirre-Planter E, Eguiarte LE
    Genetic and ecological characterization of the giant reed (Arundo donax) in Central Mexico.
    PLoS One. 2025;20:e0319214.
    PubMed     Abstract available


  81. PHOCHANTACHINDA S, Photcharatinnakorn P, Chatchaisak D, Sakcamduang W, et al
    Plasma-based proteomics analysis of molecular pathways in canine diabetes mellitus after astaxanthin supplementation.
    PLoS One. 2025;20:e0321509.
    PubMed     Abstract available


  82. JAVAROTTI NB, Ayala-Burbano PA, Pissinati A, Marques MC, et al
    Genetic monitoring in ex situ populations of the endangered primate Leontopithecus chrysopygus and integrative analyses with the wild founder population.
    PLoS One. 2025;20:e0322817.
    PubMed     Abstract available


  83. JEGEDE A, Balogun O, Olorunsogbon OF, Nichols M, et al
    Research participants' perception of ethical issues in stroke genomics and neurobiobanking research in Africa.
    PLoS One. 2025;20:e0292906.
    PubMed     Abstract available


  84. SHALAGINOVA I, Pavlova M, Dyuzhikova N
    capital A, Cyrillicmygdala DEGs are associated with the immune system function: A comparative transcriptomic study of high- and low-excitability rat strains.
    PLoS One. 2025;20:e0323325.
    PubMed     Abstract available


  85. GONZALES S, Zhao JZ, Choi NY, Acharya P, et al
    SOX7: Autism associated gene identified by analysis of multi-Omics data.
    PLoS One. 2025;20:e0320096.
    PubMed     Abstract available


  86. LOZANO-AGUIRRE L, Duran-Bedolla J, Tellez-Sosa J, Hernandez-Perez CF, et al
    Genomic insights into the serovar prevalence, antimicrobial resistance gene, and genetic diversity of Salmonella enterica in Mexico.
    PLoS One. 2025;20:e0323872.
    PubMed     Abstract available


  87. BRAR HK, Chen E, Chang F, Lu SA, et al
    Leishmania regulates host YY1: Comparative proteomic analysis identifies infection modulated YY1 dependent proteins.
    PLoS One. 2025;20:e0323227.
    PubMed     Abstract available


  88. KHAJORNPIPAT P, Reamtong O, Aunpad R
    Rational engineering unlocks the therapeutic potential of WHP1: A revolutionary peptide poised to advance wound healing.
    PLoS One. 2025;20:e0323363.
    PubMed     Abstract available


  89. LLARENA AK, Haverkamp THA, Gulliksen WS, Herstad K, et al
    DNA extraction protocols for animal fecal material on blood spot cards.
    PLoS One. 2025;20:e0313808.
    PubMed     Abstract available


  90. MIDDLETON RC, Karpov OA, Fournier M, Kreimer S, et al
    Impact of cardiosphere-derived cells on the maladapted right ventricular muscle in a rat sugen/hypoxia model of pulmonary hypertension with right ventricular dysfunction.
    PLoS One. 2025;20:e0321895.
    PubMed     Abstract available


  91. ELKARHAT Z, Tifrouin I, Bamouh Z, Tadlaoui KO, et al
    First identification of ORF virus causing contagious ecthyma in Morocco (MOR20): Genomic, phylogenetic, and sequence variants analyses for vaccine design.
    PLoS One. 2025;20:e0323383.
    PubMed     Abstract available


  92. XUE Q, Du L, Deng T, Liang M, et al
    Integrating genomics and transcriptomics reveals candidate genes affecting loin muscle area in Huaxi cattle.
    PLoS One. 2025;20:e0322026.
    PubMed     Abstract available


  93. KIIGE JK, Kavoo AM, Mwajita MR, Mogire D, et al
    Metagenomic characterization of bacterial abundance and diversity in potato cyst nematode suppressive and conducive potato rhizosphere.
    PLoS One. 2025;20:e0323382.
    PubMed     Abstract available


  94. ABDILLAH A, Ravaux I, Mokhtari S, Ranque S, et al
    Do Malassezia yeasts colonize the guts of people living with HIV?
    PLoS One. 2025;20:e0322982.
    PubMed     Abstract available


  95. LUTSCHINI IRT, Ballard KR, Wang T, Cummins SF, et al
    Acetylcholinesterase-like proteins are a major component of reproductive trail mucus in the invasive pest land snail, Theba pisana.
    PLoS One. 2025;20:e0323380.
    PubMed     Abstract available


  96. TIAN ZQ, Jiang CY, Shu YM, Zhang H, et al
    Population genetic diversity and structure of the endangered species Tetracentron sinense Oliver (Tetracentraceae) with SNPs based on RAD sequencing.
    PLoS One. 2025;20:e0324161.
    PubMed     Abstract available


  97. BOUEROY P, Chopjitt P, Borthong J, Wongsurawat T, et al
    Comparative genomic analysis of Streptococcus suis sequence type 105 and development of a PCR diagnostic tool.
    PLoS One. 2025;20:e0324636.
    PubMed     Abstract available


  98. KOHNERT E, Kreutz C
    Benchmarking Differential Abundance Tests for 16S microbiome sequencing data using simulated data based on experimental templates.
    PLoS One. 2025;20:e0321452.
    PubMed     Abstract available


  99. SAMANTA A, Yoo MJ, Koh J, Lufkin SC, et al
    Proteomic profiling of small extracellular vesicles from bovine nucleus pulposus cells.
    PLoS One. 2025;20:e0324179.
    PubMed     Abstract available


  100. ZHANG W, Mei Y, Wang J
    Verification of the chromosome number using cytogenetics and estimation of genome size via flow cytometry and k-mer analyses for representative Anoectochilus roxburghii accessions.
    PLoS One. 2025;20:e0322457.
    PubMed     Abstract available


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    PubMed     Abstract available


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  418. OMAR NM, Fleury K, Beardsall B, Prasil O, et al
    Genomic capacities for Reactive Oxygen Species metabolism across marine phytoplankton.
    PLoS One. 2023;18:e0284580.
    PubMed     Abstract available


  419. LATHAM S, Hughes E, Budgen B, Morley A, et al
    Inhibition of the PCR by genomic DNA.
    PLoS One. 2023;18:e0284538.
    PubMed     Abstract available


  420. CANCELA F, Ramos N, Smyth DS, Etchebehere C, et al
    Wastewater surveillance of SARS-CoV-2 genomic populations on a country-wide scale through targeted sequencing.
    PLoS One. 2023;18:e0284483.
    PubMed     Abstract available


  421. XUE X, Zhang W, Fan A
    Comparative analysis of gene ontology-based semantic similarity measurements for the application of identifying essential proteins.
    PLoS One. 2023;18:e0284274.
    PubMed     Abstract available


  422. MASCARELLO M, Lachenaud O, Amalfi M, Smets E, et al
    Genetic characterization of a group of commercial African timber species: From genomics to barcoding.
    PLoS One. 2023;18:e0284732.
    PubMed     Abstract available


  423. PROIETTI R, Maranho Neto GA, Kunzova S, Lo Re O, et al
    Pharmacogenomic profile of a central European urban random population-Czech population.
    PLoS One. 2023;18:e0284386.
    PubMed     Abstract available


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    Mutability of druggable kinases and pro-inflammatory cytokines by their proximity to telomeres and A+T content.
    PLoS One. 2023;18:e0283470.
    PubMed     Abstract available


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    Once upon a time in Mexico: Holocene biogeography of the spotted bat (Euderma maculatum).
    PLoS One. 2023;18:e0274342.
    PubMed     Abstract available


  426. NAIZABEKOV S, Hyun SW, Na JG, Yoon S, et al
    Comparative genomic analysis of Methylocystis sp. MJC1 as a platform strain for polyhydroxybutyrate biosynthesis.
    PLoS One. 2023;18:e0284846.
    PubMed     Abstract available


  427. YANG G, Chen Y, Li Q, Benitez D, et al
    Dental size variation in admixed Latin Americans: Effects of age, sex and genomic ancestry.
    PLoS One. 2023;18:e0285264.
    PubMed     Abstract available


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    Systematics and phylogeography of bats of the genus Rhynchonycteris (Chiroptera: Emballonuridae): Integrating molecular phylogenetics, ecological niche modeling and morphometric data.
    PLoS One. 2023;18:e0285271.
    PubMed     Abstract available


  429. BARCELO-ANTEMATE D, Fontove-Herrera F, Santos W, Merino E, et al
    The effect of the genomic GC content bias of prokaryotic organisms on the secondary structures of their proteins.
    PLoS One. 2023;18:e0285201.
    PubMed     Abstract available


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    Phenopacket-tools: Building and validating GA4GH Phenopackets.
    PLoS One. 2023;18:e0285433.
    PubMed     Abstract available


  431. MATSVAY A, Klink GV, Safina KR, Nabieva E, et al
    Genomic epidemiology of SARS-CoV-2 in Russia reveals recurring cross-border transmission throughout 2020.
    PLoS One. 2023;18:e0285664.
    PubMed     Abstract available


  432. PRICE RJ, Davik J, Fernandez Fernandez F, Bates HJ, et al
    Chromosome-scale genome sequence assemblies of the 'Autumn Bliss' and 'Malling Jewel' cultivars of the highly heterozygous red raspberry (Rubus idaeus L.) derived from long-read Oxford Nanopore sequence data.
    PLoS One. 2023;18:e0285756.
    PubMed     Abstract available


  433. ZHANG J, Li K, Bu X, Cheng S, et al
    Characterization of the anti-pathogenic, genomic and phenotypic properties of a Lacticaseibacillus rhamnosus VHProbi M14 isolate.
    PLoS One. 2023;18:e0285480.
    PubMed     Abstract available


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    A systematic review of the protein composition of whole saliva in subjects with healthy periodontium compared with chronic periodontitis.
    PLoS One. 2023;18:e0286079.
    PubMed     Abstract available


  435. BASHEER A, Zahoor I, Yaqub T
    Genomic architecture and evolutionary relationship of BA.2.75: A Centaurus subvariant of Omicron SARS-CoV-2.
    PLoS One. 2023;18:e0281159.
    PubMed     Abstract available


  436. KIM S, Kim Y, Kim Y, Yoon S, et al
    PCNA Ser46-Leu47 residues are crucial in preserving genomic integrity.
    PLoS One. 2023;18:e0285337.
    PubMed     Abstract available


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    Large genomic deletions delineate Mycobacterium tuberculosis L4 sublineages in South American countries.
    PLoS One. 2023;18:e0285417.
    PubMed     Abstract available


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    Plasma proteome perturbation for CMV DNAemia in kidney transplantation.
    PLoS One. 2023;18:e0285870.
    PubMed     Abstract available


  439. PEARSON S, Blance R, Yan F, Hsieh YC, et al
    Identification of curaxin as a potential new therapeutic for JAK2 V617F mutant patients.
    PLoS One. 2023;18:e0286412.
    PubMed     Abstract available


  440. NISHINO M, Fujimori M, Koyama T, Hirata M, et al
    Prevalence of psychological distress, quality of life, and satisfaction among patients and family members following comprehensive genomic profiling testing: Protocol of the Quality of life for Cancer genomics and Advanced Therapeutics (Q-CAT) study.
    PLoS One. 2023;18:e0283968.
    PubMed     Abstract available


  441. ANLAY DZ, Riviere E, Tu PHT, Abrams S, et al
    A Bayesian approach to estimate the probability of resistance to bedaquiline in the presence of a genomic variant.
    PLoS One. 2023;18:e0287019.
    PubMed     Abstract available


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    Peptide encoded by lncRNA BVES-AS1 promotes cell viability, migration, and invasion in colorectal cancer cells via the SRC/mTOR signaling pathway.
    PLoS One. 2023;18:e0287133.
    PubMed     Abstract available


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    Introducing a new type of alternative laryngeal mucosa model.
    PLoS One. 2023;18:e0287634.
    PubMed     Abstract available


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    AirDNA sampler: An efficient and simple device enabling high-yield, high-quality airborne environment DNA for metagenomic applications.
    PLoS One. 2023;18:e0287567.
    PubMed     Abstract available


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    Effects of heterozygous deletion of autism-related gene Cullin-3 in mice.
    PLoS One. 2023;18:e0283299.
    PubMed     Abstract available


  446. PUSTAM A, Jayaraman J, Ramsubhag A
    Comparative genomics and virulome analysis reveal unique features associated with clinical strains of Klebsiella pneumoniae and Klebsiella quasipneumoniae from Trinidad, West Indies.
    PLoS One. 2023;18:e0283583.
    PubMed     Abstract available


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    Alkaline-SDS cell lysis of microbes with acetone protein precipitation for proteomic sample preparation in 96-well plate format.
    PLoS One. 2023;18:e0288102.
    PubMed     Abstract available


  448. TOMOZAWA C, Kaneko M, Sasaki M, Miyake H, et al
    Clients' and genetic counselors' perceptions of empathy in Japan: A pilot study of simulated consultations of genetic counseling.
    PLoS One. 2023;18:e0288881.
    PubMed     Abstract available


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    hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks.
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    PubMed     Abstract available


  450. ZELELIE TZ, Eguale T, Yitayew B, Abeje D, et al
    Molecular epidemiology and antimicrobial susceptibility of diarrheagenic Escherichia coli isolated from children under age five with and without diarrhea in Central Ethiopia.
    PLoS One. 2023;18:e0288517.
    PubMed     Abstract available


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    Global phylogeographical distribution of Gloeoporus dichrous.
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    PubMed     Abstract available


  452. ROMERO-GONZALEZ LE, Rojas-Vargas J, Muriel-Millan LF, Bustos-Martinez J, et al
    Genomic and phenotypic characterization of Pseudomonas sp. GOM7, a novel marine bacterial species with antimicrobial activity against multidrug-resistant Staphylococcus aureus.
    PLoS One. 2023;18:e0288504.
    PubMed     Abstract available


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    Better late than never: Optimising the proteomic analysis of field-collected octopus.
    PLoS One. 2023;18:e0288084.
    PubMed     Abstract available


  454. KIM G, Hwang UW
    The population genetic structure and phylogeographic dispersal of Nodularia breviconcha in the Korean Peninsula based on COI and 16S rRNA genes.
    PLoS One. 2023;18:e0288518.
    PubMed     Abstract available


  455. NANTONGO JS, Odoi JB, Agaba H, Gwali S, et al
    Genetic diversity and population structure of Vernonia amygdalina Del. in Uganda based on genome wide markers.
    PLoS One. 2023;18:e0283563.
    PubMed     Abstract available


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    Genomic alterations involved in fluoroquinolone resistance development in Staphylococcus aureus.
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    PubMed     Abstract available


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    The respiratory syncytial virus M2-2 protein is targeted for proteasome degradation and inhibits translation and stress granules assembly.
    PLoS One. 2023;18:e0289100.
    PubMed     Abstract available


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    Clinical, laboratory, and molecular epidemiology of Orientia tsutsugamushi infection from Southwestern India.
    PLoS One. 2023;18:e0289126.
    PubMed     Abstract available


  459. SERRANA JM, Watanabe K
    Haplotype-level metabarcoding of freshwater macroinvertebrate species: A prospective tool for population genetic analysis.
    PLoS One. 2023;18:e0289056.
    PubMed     Abstract available


  460. CHEN C, Khanthiyong B, Charoenlappanit S, Roytrakul S, et al
    Cholinergic-estrogen interaction is associated with the effect of education on attenuating cognitive sex differences in a Thai healthy population.
    PLoS One. 2023;18:e0278080.
    PubMed     Abstract available


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    Transposable element insertions in 1000 Swedish individuals.
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    PubMed     Abstract available


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    Genomic characterization and virulence of Streptococcus suis serotype 4 clonal complex 94 recovered from human and swine samples.
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    PubMed     Abstract available


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    Genome-wide analysis highlights genetic admixture in exotic germplasm resources of Eucalyptus and unexpected ancestral genomic composition of interspecific hybrids.
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    PubMed     Abstract available


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    PLoS One. 2023;18:e0289648.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0288371.
    PubMed     Abstract available


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    PubMed     Abstract available


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    Indigenous cattle of Sri Lanka: Genetic and phylogeographic relationship with Zebu of Indus Valley and South Indian origin.
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    PubMed     Abstract available


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    PubMed     Abstract available


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    PubMed     Abstract available


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    PubMed     Abstract available


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    Persistent Salmonella enterica serovar Typhi sub-populations within host interrogated by whole genome sequencing and metagenomics.
    PLoS One. 2023;18:e0289070.
    PubMed     Abstract available


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    Microbial Gene Ontology informed deep neural network for microbe functionality discovery in human diseases.
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    PubMed     Abstract available


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    Comparative proteomic analysis of exosomes derived from endothelial cells and Schwann cells.
    PLoS One. 2023;18:e0290155.
    PubMed     Abstract available


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    Multidimensional scaling methods can reconstruct genomic DNA loops using Hi-C data properties.
    PLoS One. 2023;18:e0289651.
    PubMed     Abstract available


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    Genomic characterization of Campylobacter isolates in Huzhou, China.
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    PubMed     Abstract available


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    The molecular epidemiology and antimicrobial resistance of Staphylococcus pseudintermedius canine clinical isolates submitted to a veterinary diagnostic laboratory in South Africa.
    PLoS One. 2023;18:e0290645.
    PubMed     Abstract available


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    Reconciliation and evolution of Penicillium rubens genome-scale metabolic networks-What about specialised metabolism?
    PLoS One. 2023;18:e0289757.
    PubMed     Abstract available


  478. AROH O, Liles MR, Halanych KM
    Genomic characterization of a novel, widely distributed Mycoplasma species "Candidatus Mycoplasma mahonii" associated with the brittlestar Gorgonocephalus chilensis.
    PLoS One. 2023;18:e0290305.
    PubMed     Abstract available


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    Comparison of the broncoalveolar lavage fluid proteomics between foals and adult horses.
    PLoS One. 2023;18:e0290778.
    PubMed     Abstract available


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    Sertoli cell-enriched proteins in mouse and human testicular interstitial fluid.
    PLoS One. 2023;18:e0290846.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0289784.
    PubMed     Abstract available


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    Population genetic testing and SERPINA1 sequencing identifies unidentified alpha-1 antitrypsin deficiency alleles and gene-environment interaction with hepatitis C infection.
    PLoS One. 2023;18:e0286469.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0291164.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0291540.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0291736.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0291492.
    PubMed     Abstract available


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    Comparative physicochemical, hormonal, transcriptomic and proteomic analyses provide new insights into the formation mechanism of two chemotypes of Pogostemon cablin.
    PLoS One. 2023;18:e0290402.
    PubMed     Abstract available


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    The effect of ascertainment on penetrance estimates for rare variants: Implications for establishing pathogenicity and for genetic counselling.
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    PubMed     Abstract available


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    PubMed     Abstract available


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    Whole-genome resequencing-based characterization of a durum wheat landrace showing similarity to 'Senatore Cappelli'.
    PLoS One. 2023;18:e0291430.
    PubMed     Abstract available


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    Analytical validation of GenoPharm a clinical genotyping open array panel of 46 pharmacogenes inclusive of variants unique to people of African ancestry.
    PLoS One. 2023;18:e0292131.
    PubMed     Abstract available


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    Genomic selection for salinity tolerance in japonica rice.
    PLoS One. 2023;18:e0291833.
    PubMed     Abstract available


  493. AN SM, Kim BY, Kang H, Lee HR, et al
    The complete chloroplast genome sequences of six Hylotelephium species: Comparative genomic analysis and phylogenetic relationships.
    PLoS One. 2023;18:e0292056.
    PubMed     Abstract available


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    The Himalayan uplift and evolution of aquatic biodiversity across Asia: Snowtrout (Cyprininae: Schizothorax) as a test case.
    PLoS One. 2023;18:e0289736.
    PubMed     Abstract available


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    A web-based platform for the annotation and analysis of NAR-published databases.
    PLoS One. 2023;18:e0293134.
    PubMed     Abstract available


  496. KHADIRNAIKAR S, Shukla S, Prasanna SRM
    Integration of pan-cancer multi-omics data for novel mixed subgroup identification using machine learning methods.
    PLoS One. 2023;18:e0287176.
    PubMed     Abstract available


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    PLoS One. 2023;18:e0292401.
    PubMed     Abstract available


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    On the conservation of white-clawed crayfish in the Iberian Peninsula: Unraveling its genetic diversity and structure, and origin.
    PLoS One. 2023;18:e0292679.
    PubMed     Abstract available


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    A live-cell platform to isolate phenotypically defined subpopulations for spatial multi-omic profiling.
    PLoS One. 2023;18:e0292554.
    PubMed     Abstract available


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    First genome-wide data from Italian European beech (Fagus sylvatica L.): Strong and ancient differentiation between Alps and Apennines.
    PLoS One. 2023;18:e0288986.
    PubMed     Abstract available


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    Serum proteomic profile of wild stump-tailed macaques (Macaca arctoides) infected with malaria parasites in Thailand.
    PLoS One. 2023;18:e0293579.
    PubMed     Abstract available


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    Genomic and demographic processes differentially influence genetic variation across the human X chromosome.
    PLoS One. 2023;18:e0287609.
    PubMed     Abstract available


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    Molecular classification of human papilloma virus-negative head and neck squamous cell carcinomas: Cell cycle-based classifier and prognostic signature.
    PLoS One. 2023;18:e0286414.
    PubMed     Abstract available


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    Reassessing the genetic variability of Tectona grandis through high-throughput genotyping: Insights on its narrow genetic base.
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    PubMed     Abstract available


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    Are the predicted known bacterial strains in a sample really present? A case study.
    PLoS One. 2023;18:e0291964.
    PubMed     Abstract available


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    Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
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    PubMed     Abstract available


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    Newly discovered genomic mutation patterns in radiation-induced small intestinal tumors of ApcMin/+ mice.
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    PubMed     Abstract available


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    Genomic diversity and population structure of teosinte (Zea spp.) and its conservation implications.
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    Mitogenome of the stink bug Aelia fieberi (Hemiptera: Pentatomidae) and a comparative genomic analysis between phytophagous and predatory members of Pentatomidae.
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    PubMed     Abstract available


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    Deep coverage and quantification of the bone proteome provides enhanced opportunities for new discoveries in skeletal biology and disease.
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    Identification of New Mycobacterium bovis antigens and development of a multiplexed serological bead-immunoassay for the diagnosis of bovine tuberculosis in cattle.
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    PubMed     Abstract available


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    PubMed     Abstract available


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    PubMed     Abstract available


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    Rational therapeutic targets with biomolecular liquid-liquid phase separation regulating synergy: A pan-cancer analysis.
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    Data sharing practices in collaborative human genomic research in low- and middle-income countries: A systematic review protocol.
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    Food safety and biological control; genomic insights and antimicrobial potential of Bacillus velezensis FB2 against agricultural fungal pathogens.
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    Population genomics provides insights into the genetic diversity and adaptation of the Pieris rapae in China.
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    Proteomics reveals differentially regulated pathways when comparing grade 2 and 4 astrocytomas.
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    PubMed     Abstract available


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