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  Genetics

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25.08.2025

1 BMC Cancer
3 Br J Cancer
1 Cell
1 FEMS Microbiol Lett
2 Nat Rev Genet
3 Nature
1 PLoS Genet
6 PLoS One
3 Proc Natl Acad Sci U S A


  Retrieve available abstracts of this week’s articles:
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Single Articles


    BMC Cancer

  1. CHEN W, Xu J, Yu C, Zhou M, et al
    Analysis of genomic heterogeneity and the mutational landscape in cutaneous squamous cell carcinoma through multi-patient-targeted single-cell DNA sequencing.
    BMC Cancer. 2025;25:1362.
    PubMed         Abstract available


    Br J Cancer

  2. BARRAUD S, Vacher S, Schiffler C, Wong J, et al
    Genomic landscape of estrogen receptor-positive HER2-negative advanced breast cancer with acquired resistance to aromatase inhibitors: Identification of an ESR1 alteration-related gene signature.
    Br J Cancer. 2025 Jun 12. doi: 10.1038/s41416-025-03083.
    PubMed         Abstract available

  3. LI Y, Yuan X, Yin XF, Zheng D, et al
    Proteomics analysis and immune profiling reveal regulators of PD-L1 in oesophageal squamous cell carcinoma.
    Br J Cancer. 2025;133:448-463.
    PubMed         Abstract available

  4. LAN Z, Yang Y, Li L, Wang C, et al
    Spatial omics technology potentially promotes the progress of tumor immunotherapy.
    Br J Cancer. 2025;133:421-434.
    PubMed         Abstract available


    Cell

  5. KALTENECKER D, Fisker Schmidt S, Weber P, Loft A, et al
    Functional liver genomics identifies hepatokines promoting wasting in cancer cachexia.
    Cell. 2025;188:4549-4566.
    PubMed         Abstract available


    FEMS Microbiol Lett

  6. PARK HS, Chavarria X, Shatta A, Kang D, et al
    Distinct microbial communities of drain flies (Clogmia albipunctata) across sites with differing human influence.
    FEMS Microbiol Lett. 2025;372:fnaf078.
    PubMed         Abstract available


    Nat Rev Genet

  7. LEHMANN B, Brauninger L, Cho Y, Falck F, et al
    Methodological opportunities in genomic data analysis to advance health equity.
    Nat Rev Genet. 2025;26:635-649.
    PubMed         Abstract available

  8. FU Y, Timp W, Sedlazeck FJ
    Computational analysis of DNA methylation from long-read sequencing.
    Nat Rev Genet. 2025;26:620-634.
    PubMed         Abstract available


    Nature

  9. LOGSDON GA, Ebert P, Audano PA, Loftus M, et al
    Complex genetic variation in nearly complete human genomes.
    Nature. 2025;644:430-441.
    PubMed         Abstract available

  10. SCHLOISSNIG S, Pani S, Ebler J, Hain C, et al
    Structural variation in 1,019 diverse humans based on long-read sequencing.
    Nature. 2025;644:442-452.
    PubMed         Abstract available

  11. WANG X, Huang H, Jiang S, Kang J, et al
    A single-cell multi-omics atlas of rice.
    Nature. 2025;644:722-730.
    PubMed         Abstract available


    PLoS Genet

  12. LYU Z, Si G, Xing M, Li W, et al
    Circulating proteins associated with histological subtypes of lung cancer from genetic and population-based perspectives.
    PLoS Genet. 2025;21:e1011821.
    PubMed         Abstract available


    PLoS One

  13. EMMERSON S, Fujihira H, Suzuki T, Dohmae N, et al
    Comparative proteomics of HepG2 cells reveals NGLY1 as an important regulator of ferroptosis resistance and iron uptake.
    PLoS One. 2025;20:e0328166.
    PubMed         Abstract available

  14. ARUVORNLOP P, Ploypetch S, Sakcamduang W, Sirivisoot S, et al
    Phosphoproteomic profiling of feline mammary carcinoma: Insights into tumor grading and potential therapeutic targets.
    PLoS One. 2025;20:e0330520.
    PubMed         Abstract available

  15. CHOWDHURY ARK, Tithi FY, Bhuiyan NZ, Ishita AF, et al
    Harnessing subtractive genomics for drug target identification in Streptococcus agalactiae serotype v (atcc baa-611 / 2603 v/r) strain: An in-silico approach.
    PLoS One. 2025;20:e0319368.
    PubMed         Abstract available

  16. DEKKER JAA, Hagan R, Collins M, Hendy J, et al
    An unclean slate, discrepancies between food input and recovered protein signal from experimental foodcrusts.
    PLoS One. 2025;20:e0330195.
    PubMed         Abstract available

  17. CHEN Z, Lu ZT, Song XT, Gao YF, et al
    A novel and robust feature selection method with FDR control for omics-wide association analysis.
    PLoS One. 2025;20:e0300490.
    PubMed         Abstract available

  18. MEESIL W, Sharkey LKR, Pidot SJ, Thanwisai A, et al
    Comprehensive genomic analysis of Xenorhabdus bovienii strain MEL2.2.
    PLoS One. 2025;20:e0331132.
    PubMed         Abstract available


    Proc Natl Acad Sci U S A

  19. GUJRAL O, Bafna M, Alm E, Berger B, et al
    Sparse autoencoders uncover biologically interpretable features in protein language model representations.
    Proc Natl Acad Sci U S A. 2025;122:e2506316122.
    PubMed         Abstract available

  20. IZQUIERDO-ARANEGA G, Cuevas-Caballe C, Giannelli F, Paris JR, et al
    Pervasive and recurrent hybridization prevents inbreeding in Europe's most threatened seabird.
    Proc Natl Acad Sci U S A. 2025;122:e2427223122.
    PubMed         Abstract available

  21. XIE T, Lin D, Cai XD, Ma LJ, et al
    Nano-biochar regulates phage-host interactions, reducing antibiotic resistance genes in vermicomposting systems.
    Proc Natl Acad Sci U S A. 2025;122:e2511986122.
    PubMed         Abstract available


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