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Articles published in J Clin Microbiol

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Single Articles


    July 2022
  1. LAI E, Kennedy EB, Lozach J, Hayashibara K, et al
    A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron.
    J Clin Microbiol. 2022;60:e0034222.
    PubMed     Abstract available


  2. FASCHING CL, Servellita V, McKay B, Nagesh V, et al
    COVID-19 Variant Detection with a High-Fidelity CRISPR-Cas12 Enzyme.
    J Clin Microbiol. 2022;60:e0026122.
    PubMed     Abstract available


  3. ROBINSON ML, Mirza A, Gallagher N, Boudreau A, et al
    Limitations of Molecular and Antigen Test Performance for SARS-CoV-2 in Symptomatic and Asymptomatic COVID-19 Contacts.
    J Clin Microbiol. 2022;60:e0018722.
    PubMed     Abstract available


  4. GASTON DC, Miller HB, Fissel JA, Jacobs E, et al
    Evaluation of Metagenomic and Targeted Next-Generation Sequencing Workflows for Detection of Respiratory Pathogens from Bronchoalveolar Lavage Fluid Specimens.
    J Clin Microbiol. 2022;60:e0052622.
    PubMed     Abstract available


  5. WEIDMANN MD, Berry GJ, Zucker JE, Huang S, et al
    Bacterial Pneumonia and Respiratory Culture Utilization among Hospitalized Patients with and without COVID-19 in a New York City Hospital.
    J Clin Microbiol. 2022;60:e0017422.
    PubMed     Abstract available


  6. LICHTENEGGER S, Saiger S, Hardt M, Kulnik S, et al
    Development of a Rapid Live SARS-CoV-2 Neutralization Assay Based on a qPCR Readout.
    J Clin Microbiol. 2022;60:e0037622.
    PubMed     Abstract available


  7. DOERN CD, Miller MB, Alby K, Bachman MA, et al
    Proceedings of the Clinical Microbiology Open 2018 and 2019 - a Discussion about Emerging Trends, Challenges, and the Future of Clinical Microbiology.
    J Clin Microbiol. 2022;60:e0009222.
    PubMed     Abstract available


    June 2022
  8. RODINO KG, Peaper DR, Kelly BJ, Bushman F, et al
    Partial ORF1ab Gene Target Failure with Omicron BA.2.12.1.
    J Clin Microbiol. 2022;60:e0060022.
    PubMed     Abstract available


  9. DESCHERMEIER C, Ehmen C, von Possel R, Murawski C, et al
    Fcgamma-Receptor-Based Enzyme-Linked Immunosorbent Assays for Sensitive, Specific, and Persistent Detection of Anti-SARS-CoV-2 Nucleocapsid Protein IgG Antibodies in Human Sera.
    J Clin Microbiol. 2022;60:e0007522.
    PubMed     Abstract available


  10. MISRA A, Theel ES
    Immunity to SARS-CoV-2: What Do We Know and Should We Be Testing for It?
    J Clin Microbiol. 2022;60:e0048221.
    PubMed     Abstract available


    May 2022
  11. YEUNG PS, Wang H, Sibai M, Solis D, et al
    Evaluation of a Rapid and Accessible Reverse Transcription-Quantitative PCR Approach for SARS-CoV-2 Variant of Concern Identification.
    J Clin Microbiol. 2022;60:e0017822.
    PubMed     Abstract available


  12. STANLEY S, Hamel DJ, Wolf ID, Riedel S, et al
    Limit of Detection for Rapid Antigen Testing of the SARS-CoV-2 Omicron and Delta Variants of Concern Using Live-Virus Culture.
    J Clin Microbiol. 2022;60:e0014022.
    PubMed    


  13. BERRY GJ, Zhen W, Smith E, Manji R, et al
    Multicenter Evaluation of the BioFire Respiratory Panel 2.1 (RP2.1) for Detection of SARS-CoV-2 in Nasopharyngeal Swab Samples.
    J Clin Microbiol. 2022;60:e0006622.
    PubMed     Abstract available


    April 2022
  14. ASHFORD F, Best A, Dunn SJ, Ahmed Z, et al
    SARS-CoV-2 Testing in the Community: Testing Positive Samples with the TaqMan SARS-CoV-2 Mutation Panel To Find Variants in Real Time.
    J Clin Microbiol. 2022;60:e0240821.
    PubMed     Abstract available


  15. LAITMAN AM, Lieberman JA, Hoffman NG, Roychoudhury P, et al
    The SARS-CoV-2 Omicron Variant Does Not Have Higher Nasal Viral Loads Compared to the Delta Variant in Symptomatic and Asymptomatic Individuals.
    J Clin Microbiol. 2022;60:e0013922.
    PubMed    


  16. CHEN Y, Han Y, Yang J, Ma Y, et al
    Impact of SARS-CoV-2 Variants on the Analytical Sensitivity of rRT-PCR Assays.
    J Clin Microbiol. 2022;60:e0237421.
    PubMed     Abstract available


  17. RATCLIFF J, Al-Beidh F, Bibi S, Bonsall D, et al
    Highly Sensitive Lineage Discrimination of SARS-CoV-2 Variants through Allele-Specific Probe PCR.
    J Clin Microbiol. 2022;60:e0228321.
    PubMed     Abstract available


  18. CHOI H, Hwang M, Navarathna DH, Xu J, et al
    Performance of COVIDSeq and Swift Normalase Amplicon SARS-CoV-2 Panels for SARS-CoV-2 Genome Sequencing: Practical Guide and Combining FASTQ Strategy.
    J Clin Microbiol. 2022;60:e0002522.
    PubMed    


  19. FISSEL JA, Mestas J, Chen PY, Flores-Vazquez J, et al
    Implementation of a Streamlined SARS-CoV-2 Whole-Genome Sequencing Assay for Expeditious Surveillance during the Emergence of the Omicron Variant.
    J Clin Microbiol. 2022;60:e0256921.
    PubMed    


  20. SMITH BF, Graven PF, Yang DY, Downs SM, et al
    Using Spike Gene Target Failure to Estimate Growth Rate of the Alpha and Omicron Variants of SARS-CoV-2.
    J Clin Microbiol. 2022;60:e0257321.
    PubMed    


    March 2022
  21. GIACOBBE DR, Prattes J, Wauters J, Dettori S, et al
    Prognostic Impact of Bronchoalveolar Lavage Fluid Galactomannan and Aspergillus Culture Results on Survival in COVID-19 Intensive Care Unit Patients: a Post Hoc Analysis from the European Confederation of Medical Mycology (ECMM) COVID-19-Associated Pu
    J Clin Microbiol. 2022 Mar 24:e0229821. doi: 10.1128/jcm.02298.
    PubMed     Abstract available


  22. MCADAM AJ
    Clinical Laboratory Budgets during the COVID-19 Pandemic: a Micro-Comic Strip.
    J Clin Microbiol. 2022;60:e0009622.
    PubMed    


  23. PHAN T, Boes S, McCullough M, Gribschaw J, et al
    Development of a One-Step Qualitative RT-PCR Assay to Detect the SARS-CoV-2 Omicron (B.1.1.529) Variant in Respiratory Specimens.
    J Clin Microbiol. 2022;60:e0002422.
    PubMed    


  24. BECK EJ, Hsieh YH, Fernandez RE, Dashler G, et al
    Differentiation of Individuals Previously Infected with and Vaccinated for SARS-CoV-2 in an Inner-City Emergency Department.
    J Clin Microbiol. 2022;60:e0239021.
    PubMed     Abstract available


  25. BARREIRO P, Sanz JC, San Roman J, Perez-Abeledo M, et al
    A Pilot Study for the Evaluation of an Interferon Gamma Release Assay (IGRA) To Measure T-Cell Immune Responses after SARS-CoV-2 Infection or Vaccination in a Unique Cloistered Cohort.
    J Clin Microbiol. 2022;60:e0219921.
    PubMed     Abstract available


  26. WANG J, Hawken SE, Jones CD, Hagan RS, et al
    Collaboration between Clinical and Academic Laboratories for Sequencing SARS-CoV-2 Genomes.
    J Clin Microbiol. 2022;60:e0128821.
    PubMed     Abstract available


    February 2022
  27. DEERAIN J, Druce J, Tran T, Batty M, et al
    Assessment of the Analytical Sensitivity of 10 Lateral Flow Devices against the SARS-CoV-2 Omicron Variant.
    J Clin Microbiol. 2022;60:e0247921.
    PubMed    


  28. SAVELA ES, Viloria Winnett A, Romano AE, Porter MK, et al
    Quantitative SARS-CoV-2 Viral-Load Curves in Paired Saliva Samples and Nasal Swabs Inform Appropriate Respiratory Sampling Site and Analytical Test Sensitivity Required for Earliest Viral Detection.
    J Clin Microbiol. 2022;60:e0178521.
    PubMed     Abstract available


  29. NAKAGAMA Y, Nitahara Y, Kaku N, Tshibangu-Kabamba E, et al
    A Dual-Antigen SARS-CoV-2 Serological Assay Reflects Antibody Avidity.
    J Clin Microbiol. 2022;60:e0226221.
    PubMed    


  30. KOTNIK JH, Cooper S, Smedinghoff S, Gade P, et al
    Flu@home: The comparative accuracy of an at-home influenza rapid diagnostic test, using a pre-positioned test kit, mobile app, mail-in reference sample, and symptom-based testing trigger.
    J Clin Microbiol. 2022 Feb 2:JCM0207021. doi: 10.1128/JCM.02070.
    PubMed     Abstract available


    January 2022
  31. WEGNER F, Roloff T, Huber M, Cordey S, et al
    External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories.
    J Clin Microbiol. 2022;60:e0169821.
    PubMed     Abstract available


  32. GRENINGER AL, Dien Bard J, Colgrove RC, Graf EH, et al
    Clinical and Infection Prevention Applications of Severe Acute Respiratory Syndrome Coronavirus 2 Genotyping: an Infectious Diseases Society of America/American Society for Microbiology Consensus Review Document.
    J Clin Microbiol. 2022;60:e0165921.
    PubMed     Abstract available


  33. SAKER K, Escuret V, Pitiot V, Massardier-Pilonchery A, et al
    Evaluation of Commercial Anti-SARS-CoV-2 Antibody Assays and Comparison of Standardized Titers in Vaccinated Health Care Workers.
    J Clin Microbiol. 2022;60:e0174621.
    PubMed     Abstract available


  34. ALMENDARES O, Prince-Guerra JL, Nolen LD, Gunn JKL, et al
    Performance Characteristics of the Abbott BinaxNOW SARS-CoV-2 Antigen Test in Comparison to Real-Time Reverse Transcriptase PCR and Viral Culture in Community Testing Sites during November 2020.
    J Clin Microbiol. 2022;60:e0174221.
    PubMed     Abstract available


  35. SANTOS BRAVO M, Berengua C, Marin P, Esteban M, et al
    Viral Culture Confirmed SARS-CoV-2 Subgenomic RNA Value as a Good Surrogate Marker of Infectivity.
    J Clin Microbiol. 2022;60:e0160921.
    PubMed     Abstract available


  36. YANSOUNI CP, Papenburg J, Cheng MP, Corsini R, et al
    Specificity of SARS-CoV-2 Antibody Detection Assays against S and N Proteins among Pre-COVID-19 Sera from Patients with Protozoan and Helminth Parasitic Infections.
    J Clin Microbiol. 2022;60:e0171721.
    PubMed     Abstract available


  37. DELLIERE S, Dudoignon E, Voicu S, Collet M, et al
    Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?
    J Clin Microbiol. 2022 Jan 5:JCM0216921. doi: 10.1128/JCM.02169.
    PubMed     Abstract available


    December 2021
  38. YANG T, Kessler LG, Thompson MJ, Lutz BR, et al
    Requirements and study designs for US regulatory approval of influenza home tests.
    J Clin Microbiol. 2021 Dec 15:JCM0188421. doi: 10.1128/JCM.01884.
    PubMed     Abstract available


    November 2021
  39. JEONG S, Lee N, Lee SK, Cho EJ, et al
    Comparison of the Results of Five SARS-CoV-2 Antibody Assays before and after the First and Second ChAdOx1 nCoV-19 Vaccinations among Health Care Workers: a Prospective Multicenter Study.
    J Clin Microbiol. 2021;59:e0178821.
    PubMed     Abstract available


  40. YANSON K, Laviers W, Neely L, Lockamy E, et al
    Performance Evaluation of the BD SARS-CoV-2 Reagents for the BD MAX System.
    J Clin Microbiol. 2021;59:e0101921.
    PubMed     Abstract available


  41. ARMSTRONG DT, Tacheny EA, Olinger G, Howard R, et al
    SARS-CoV-2 Supply Shortages and Tuberculosis Diagnostics: Current Issues Requiring Immediate Solutions.
    J Clin Microbiol. 2021;59:e0077821.
    PubMed     Abstract available


  42. GRAF EH
    Finding the Middle Ground with the Clinical Laboratory's Role in SARS-CoV-2 Genomic Surveillance.
    J Clin Microbiol. 2021;59:e0181621.
    PubMed     Abstract available


  43. PLITNICK J, Griesemer S, Lasek-Nesselquist E, Singh N, et al
    Whole-Genome Sequencing of SARS-CoV-2: Assessment of the Ion Torrent AmpliSeq Panel and Comparison with the Illumina MiSeq ARTIC Protocol.
    J Clin Microbiol. 2021;59:e0064921.
    PubMed     Abstract available


  44. STOKES NL, Reed KA, Berbari EF, Vetter S, et al
    Evaluation of the BinaxNOW COVID-19 Rapid Antigen Test in an Asymptomatic Patient Population Undergoing Preprocedural Screening.
    J Clin Microbiol. 2021;59:e0165021.
    PubMed    


  45. LEUZINGER K, Osthoff M, Drager S, Pargger H, et al
    Comparing Immunoassays for SARS-CoV-2 Antibody Detection in Patients with and without Laboratory-Confirmed SARS-CoV-2 Infection.
    J Clin Microbiol. 2021;59:e0138121.
    PubMed     Abstract available


  46. TROBAJO-SANMARTIN C, Miqueleiz A, Portillo ME, Fernandez-Huerta M, et al
    Emergence of SARS-CoV-2 Variant B.1.575.2, Containing the E484K Mutation in the Spike Protein, in Pamplona, Spain, May to June 2021.
    J Clin Microbiol. 2021;59:e0173621.
    PubMed     Abstract available


  47. KRUSE RL, Huang Y, Lee A, Zhu X, et al
    A Hemagglutination-Based Semiquantitative Test for Point-of-Care Determination of SARS-CoV-2 Antibody Levels.
    J Clin Microbiol. 2021;59:e0118621.
    PubMed     Abstract available


  48. BABIKER A, Immergluck K, Stampfer SD, Rao A, et al
    Single-Amplicon Multiplex Real-Time Reverse Transcription-PCR with Tiled Probes To Detect SARS-CoV-2 spike Mutations Associated with Variants of Concern.
    J Clin Microbiol. 2021;59:e0144621.
    PubMed     Abstract available


    October 2021
  49. SEXTON ME, Kraft CS
    Routine Antigen Testing Is Not a Substitute for Health Care Worker Vaccination against SARS-CoV-2.
    J Clin Microbiol. 2021;59:e0156421.
    PubMed     Abstract available


  50. TCHESNOKOVA V, Kulasekara H, Larson L, Bowers V, et al
    Acquisition of the L452R Mutation in the ACE2-Binding Interface of Spike Protein Triggers Recent Massive Expansion of SARS-CoV-2 Variants.
    J Clin Microbiol. 2021;59:e0092121.
    PubMed     Abstract available


  51. PEGHIN M, De Martino M, Fabris M, Palese A, et al
    The Fall in Antibody Response to SARS-CoV-2: a Longitudinal Study of Asymptomatic to Critically Ill Patients Up to 10 Months after Recovery.
    J Clin Microbiol. 2021;59:e0113821.
    PubMed     Abstract available


  52. LAM C, Gray K, Gall M, Sadsad R, et al
    SARS-CoV-2 Genome Sequencing Methods Differ in Their Abilities To Detect Variants from Low-Viral-Load Samples.
    J Clin Microbiol. 2021;59:e0104621.
    PubMed     Abstract available


  53. BINNICKER MJ
    Can Testing Predict SARS-CoV-2 Infectivity? The Potential for Certain Methods To Be Surrogates for Replication-Competent Virus.
    J Clin Microbiol. 2021;59:e0046921.
    PubMed     Abstract available


  54. KANJI JN, Proctor DT, Stokes W, Berenger BM, et al
    Multicenter Postimplementation Assessment of the Positive Predictive Value of SARS-CoV-2 Antigen-Based Point-of-Care Tests Used for Screening of Asymptomatic Continuing Care Staff.
    J Clin Microbiol. 2021;59:e0141121.
    PubMed     Abstract available


  55. KERSH EN, Shukla M, Raphael BH, Habel M, et al
    At-Home Specimen Self-Collection and Self-Testing for Sexually Transmitted Infection Screening Demand Accelerated by the COVID-19 Pandemic: a Review of Laboratory Implementation Issues.
    J Clin Microbiol. 2021;59:e0264620.
    PubMed     Abstract available


  56. AUTIER B, Prattes J, White PL, Valerio M, et al
    Aspergillus Lateral Flow Assay with Digital Reader for the Diagnosis of COVID-19 Associated Pulmonary Aspergillosis (CAPA): A multicenter study.
    J Clin Microbiol. 2021 Oct 13:JCM0168921. doi: 10.1128/JCM.01689.
    PubMed     Abstract available


    September 2021
  57. ARNAOUT RA
    Cooperation under Pressure: Lessons from the COVID-19 Swab Crisis.
    J Clin Microbiol. 2021;59:e0123921.
    PubMed     Abstract available


  58. SHIER KL
    Elevated Rates of Indeterminate Results on QuantiFERON-TB Gold Plus in COVID-19 Patients.
    J Clin Microbiol. 2021;59:e0141421.
    PubMed     Abstract available


  59. ALLAN-BLITZ LT, Klausner JD
    A Real-World Comparison of SARS-CoV-2 Rapid Antigen Testing versus PCR Testing in Florida.
    J Clin Microbiol. 2021;59:e0110721.
    PubMed     Abstract available


  60. BLACKALL D, Moreno R, Jin J, Plotinsky R, et al
    Performance Characteristics of the Roche Diagnostics cobas Liat PCR System as a COVID-19 Screening Tool for Hospital Admissions in a Regional Health Care Delivery System.
    J Clin Microbiol. 2021;59:e0127821.
    PubMed    


  61. JACOT D, Pillonel T, Greub G, Bertelli C, et al
    Assessment of SARS-CoV-2 Genome Sequencing: Quality Criteria and Low-Frequency Variants.
    J Clin Microbiol. 2021;59:e0094421.
    PubMed     Abstract available


  62. BANADA P, Green R, Banik S, Chopoorian A, et al
    A Simple Reverse Transcriptase PCR Melting-Temperature Assay To Rapidly Screen for Widely Circulating SARS-CoV-2 Variants.
    J Clin Microbiol. 2021;59:e0084521.
    PubMed     Abstract available


  63. SHOLUKH AM, Fiore-Gartland A, Ford ES, Miner MD, et al
    Evaluation of Cell-Based and Surrogate SARS-CoV-2 Neutralization Assays.
    J Clin Microbiol. 2021;59:e0052721.
    PubMed     Abstract available


  64. PEAPER DR, Rhoads DD, Sullivan KV, Couturier MR, et al
    Considerations from the College of American Pathologists for Implementation of an Assay for SARS-CoV-2 Testing after a Change in Regulatory Status.
    J Clin Microbiol. 2021;59:e0116721.
    PubMed     Abstract available


  65. THUDIUM RF, Stoico MP, Hogdall E, Hogh J, et al
    Early Laboratory Diagnosis of COVID-19 by Antigen Detection in Blood Samples of the SARS-CoV-2 Nucleocapsid Protein.
    J Clin Microbiol. 2021;59:e0100121.
    PubMed     Abstract available


  66. WARD JD, Cornaby C, Schmitz JL
    Indeterminate QuantiFERON Gold Plus Results Reveal Deficient Interferon Gamma Responses in Severely Ill COVID-19 Patients.
    J Clin Microbiol. 2021;59:e0081121.
    PubMed     Abstract available


  67. VALINETZ ED, Cangelosi GA
    A Look Inside: Oral Sampling for Detection of Non-oral Infectious Diseases.
    J Clin Microbiol. 2021;59:e0236020.
    PubMed     Abstract available


  68. ERGUN M, Bruggemann RJM, Alanio A, Delliere S, et al
    Aspergillus test profiles and mortality in critically-ill COVID-19 patients.
    J Clin Microbiol. 2021 Sep 8:JCM0122921. doi: 10.1128/JCM.01229.
    PubMed     Abstract available


    August 2021
  69. LIU BM, Beck EM, Fisher MA
    The Brief Case: Ventilator-Associated Corynebacterium accolens Pneumonia in a Patient with Respiratory Failure Due to COVID-19.
    J Clin Microbiol. 2021;59:e0013721.
    PubMed    


  70. LIU BM, Beck EM, Fisher MA
    Closing the Brief Case: Ventilator-Associated Corynebacterium accolens Pneumonia in a Patient with Respiratory Failure Due to COVID-19.
    J Clin Microbiol. 2021;59:e0013821.
    PubMed    


  71. ENGLISH E, Cook LE, Piec I, Dervisevic S, et al
    Performance of the Abbott SARS-CoV-2 IgG II Quantitative Antibody Assay Including the New Variants of Concern, VOC 202012/V1 (United Kingdom) and VOC 202012/V2 (South Africa), and First Steps towards Global Harmonization of COVID-19 Antibody Methods.
    J Clin Microbiol. 2021;59:e0028821.
    PubMed     Abstract available


  72. KORENKOV M, Poopalasingam N, Madler M, Vanshylla K, et al
    Evaluation of a Rapid Antigen Test To Detect SARS-CoV-2 Infection and Identify Potentially Infectious Individuals.
    J Clin Microbiol. 2021;59:e0089621.
    PubMed     Abstract available


  73. POLLOCK NR, Berlin D, Smole SC, Madoff LC, et al
    Implementation of SARS-CoV2 Screening in K-12 Schools Using In-School Pooled Molecular Testing and Deconvolution by Rapid Antigen Test.
    J Clin Microbiol. 2021;59:e0112321.
    PubMed     Abstract available


  74. VAN DEN BELD MJC, Murk JL, Kluytmans J, Koopmans MPG, et al
    Increasing the Efficiency of a National Laboratory Response to COVID-19: a Nationwide Multicenter Evaluation of 47 Commercial SARS-CoV-2 Immunoassays by 41 Laboratories.
    J Clin Microbiol. 2021;59:e0076721.
    PubMed     Abstract available


  75. JEONG S, Lee N, Lee SK, Cho EJ, et al
    Comparing Results of Five SARS-CoV-2 Antibody Assays Before and After the First Dose of ChAdOx1 nCoV-19 Vaccine among Health Care Workers.
    J Clin Microbiol. 2021;59:e0110521.
    PubMed     Abstract available


  76. WHITE PL, Price JS, Backx M
    Evaluation of the Performance of the Associates of Cape Cod STAT Assay for the Diagnosis of Invasive Fungal Disease in Critical-Care Patients with COVID-19.
    J Clin Microbiol. 2021;59:e0086921.
    PubMed     Abstract available


  77. AST V, Costina V, Eichner R, Bode A, et al
    Assessing the Quality of Serological Testing in the COVID-19 Pandemic: Results of a European External Quality Assessment (EQA) Scheme for Anti-SARS-CoV-2 Antibody Detection.
    J Clin Microbiol. 2021;59:e0055921.
    PubMed     Abstract available


  78. L'HUILLIER AG, Lacour M, Sadiku D, Gadiri MA, et al
    Diagnostic Accuracy of SARS-CoV-2 Rapid Antigen Detection Testing in Symptomatic and Asymptomatic Children in the Clinical Setting.
    J Clin Microbiol. 2021;59:e0099121.
    PubMed     Abstract available


  79. THEEL ES, Johnson PW, Kunze KL, Wu L, et al
    SARS-CoV-2 Serologic Assays Dependent on Dual-Antigen Binding Demonstrate Diverging Kinetics Relative to Other Antibody Detection Methods.
    J Clin Microbiol. 2021;59:e0123121.
    PubMed     Abstract available


  80. BRADLEY BT, Bryan A, Fink SL, Goecker EA, et al
    Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity.
    J Clin Microbiol. 2021;59:e0098921.
    PubMed     Abstract available


  81. BOERGER AC, Buckwalter S, Fernholz EC, Jannetto PJ, et al
    Evaluation of Self-Collected Midturbinate Nasal Swabs and Saliva for Detection of SARS-CoV-2 RNA.
    J Clin Microbiol. 2021;59:e0084821.
    PubMed     Abstract available


  82. CALLAHAN C, Lee RA, Lee GR, Zulauf K, et al
    Nasal Swab Performance by Collection Timing, Procedure, and Method of Transport for Patients with SARS-CoV-2.
    J Clin Microbiol. 2021;59:e0056921.
    PubMed     Abstract available


    July 2021
  83. ZHANG SX, Balada-Llasat JM, Pancholi P, Sullivan KV, et al
    COVID-associated pulmonary aspergillosis in the US: is it rare or have we missed the diagnosis?
    J Clin Microbiol. 2021 Jul 21:JCM0113521. doi: 10.1128/JCM.01135.
    PubMed     Abstract available


  84. NIELSEN MC, Reynoso D, Ren P
    Closing the Brief Case: A Fatal Case of SARS-CoV-2 Coinfection with Coccidioides in Texas-Another Challenge We Face.
    J Clin Microbiol. 2021;59:e0016421.
    PubMed    


  85. NIELSEN MC, Reynoso D, Ren P
    The Brief Case: A Fatal Case of SARS-CoV-2 Coinfection with Coccidioides in Texas-Another Challenge We Face.
    J Clin Microbiol. 2021;59:e0016321.
    PubMed    


  86. WANG H, Miller JA, Verghese M, Sibai M, et al
    Multiplex SARS-CoV-2 Genotyping Reverse Transcriptase PCR for Population-Level Variant Screening and Epidemiologic Surveillance.
    J Clin Microbiol. 2021;59:e0085921.
    PubMed     Abstract available


  87. WANG H, Jean S, Eltringham R, Madison J, et al
    Mutation-Specific SARS-CoV-2 PCR Screen: Rapid and Accurate Detection of Variants of Concern and the Identification of a Newly Emerging Variant with Spike L452R Mutation.
    J Clin Microbiol. 2021;59:e0092621.
    PubMed     Abstract available


  88. CHANDLER CM, Bourassa L, Mathias PC, Greninger AL, et al
    Estimating the False-Positive Rate of Highly Automated SARS-CoV-2 Nucleic Acid Amplification Testing.
    J Clin Microbiol. 2021;59:e0108021.
    PubMed    


  89. RHOADS DD, Plunkett D, Nakitandwe J, Dempsey A, et al
    Endemic SARS-CoV-2 Polymorphisms Can Cause a Higher Diagnostic Target Failure Rate than Estimated by Aggregate Global Sequencing Data.
    J Clin Microbiol. 2021;59:e0091321.
    PubMed    


  90. KRONE M, Gutling J, Wagener J, Lam TT, et al
    Performance of Three SARS-CoV-2 Immunoassays, Three Rapid Lateral Flow Tests, and a Novel Bead-Based Affinity Surrogate Test for the Detection of SARS-CoV-2 Antibodies in Human Serum.
    J Clin Microbiol. 2021;59:e0031921.
    PubMed     Abstract available


  91. JIA HL, Li P, Liu HJ, Zhong JY, et al
    Genomic Elucidation of a COVID-19 Resurgence and Local Transmission of SARS-CoV-2 in Guangzhou, China.
    J Clin Microbiol. 2021;59:e0007921.
    PubMed     Abstract available


    June 2021
  92. MONTGOMERY TL, Paavola M, Bruce EA, Botten JW, et al
    Laboratory Worker Self-Contamination with Noninfectious SARS-CoV-2 DNA Can Result in False-Positive Reverse Transcriptase PCR-Based Surveillance Testing.
    J Clin Microbiol. 2021;59:e0072321.
    PubMed    


  93. VERGHESE M, Jiang B, Iwai N, Mar M, et al
    A SARS-CoV-2 Variant with L452R and E484Q Neutralization Resistance Mutations.
    J Clin Microbiol. 2021;59:e0074121.
    PubMed    


  94. MURAD D, Chandrasekaran S, Pillai A, Garner OB, et al
    SARS-CoV-2 Infection Detection by PCR and Serologic Testing in Clinical Practice.
    J Clin Microbiol. 2021;59:e0043121.
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  200. SOLOMON IH, Padera RF Jr
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  201. MCADAM AJ
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    March 2020
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