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	COVID-19: Daily Top 10 Papers

Influenza

Free Subscription Articles published in PLoS Comput Biol Retrieve available abstracts of 107 articles: HTML format

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May 2021
1. MOORE S, Hill EM, Dyson L, Tildesley MJ, et al
   Modelling optimal vaccination strategy for SARS-CoV-2 in the UK.
   PLoS Comput Biol. 2021;17:e1008849.
   PubMed     Abstract available
   
   
   April 2021
2. SIKORA M, von Bulow S, Blanc FEC, Gecht M, et al
   Computational epitope map of SARS-CoV-2 spike protein.
   PLoS Comput Biol. 2021;17:e1008790.
   PubMed     Abstract available
   
   
   
3. NANDA P, Ghosh A
   Genome Scale-Differential Flux Analysis reveals deregulation of lung cell metabolism on SARS-CoV-2 infection.
   PLoS Comput Biol. 2021;17:e1008860.
   PubMed     Abstract available
   
   
   March 2021
4. ZIPFEL CM, Colizza V, Bansal S
   Health inequities in influenza transmission and surveillance.
   PLoS Comput Biol. 2021;17:e1008642.
   PubMed     Abstract available
   
   
   
5. BRAULT V, Mallein B, Rupprecht JF
   Group testing as a strategy for COVID-19 epidemiological monitoring and community surveillance.
   PLoS Comput Biol. 2021;17:e1008726.
   PubMed     Abstract available
   
   
   
6. LIBIN PJK, Willem L, Verstraeten T, Torneri A, et al
   Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics.
   PLoS Comput Biol. 2021;17:e1008688.
   PubMed     Abstract available
   
   
   
7. CZUPPON P, Debarre F, Goncalves A, Tenaillon O, et al
   Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action.
   PLoS Comput Biol. 2021;17:e1008752.
   PubMed     Abstract available
   
   
   
8. DING J, Hostallero DE, El Khili MR, Fonseca GJ, et al
   A network-informed analysis of SARS-CoV-2 and hemophagocytic lymphohistiocytosis genes' interactions points to Neutrophil extracellular traps as mediators of thrombosis in COVID-19.
   PLoS Comput Biol. 2021;17:e1008810.
   PubMed     Abstract available
   
   
   
9. RICHARD Q, Alizon S, Choisy M, Sofonea MT, et al
   Age-structured non-pharmaceutical interventions for optimal control of COVID-19 epidemic.
   PLoS Comput Biol. 2021;17:e1008776.
   PubMed     Abstract available
   
   
   
10. STURNIOLO S, Waites W, Colbourn T, Manheim D, et al
    Testing, tracing and isolation in compartmental models.
    PLoS Comput Biol. 2021;17:e1008633.
    PubMed     Abstract available
    
    
    
11. DI LAURO F, Kiss IZ, Miller JC
    Optimal timing of one-shot interventions for epidemic control.
    PLoS Comput Biol. 2021;17:e1008763.
    PubMed     Abstract available
    
    
    
12. GONCALVES A, Maisonnasse P, Donati F, Albert M, et al
    SARS-CoV-2 viral dynamics in non-human primates.
    PLoS Comput Biol. 2021;17:e1008785.
    PubMed     Abstract available
    
    
    
13. HOLCOMB D, Alexaki A, Hernandez N, Hunt R, et al
    Gene variants of coagulation related proteins that interact with SARS-CoV-2.
    PLoS Comput Biol. 2021;17:e1008805.
    PubMed     Abstract available
    
    
    
14. WATSON GL, Xiong D, Zhang L, Zoller JA, et al
    Pandemic velocity: Forecasting COVID-19 in the US with a machine learning & Bayesian time series compartmental model.
    PLoS Comput Biol. 2021;17:e1008837.
    PubMed     Abstract available
    
    
    
15. TORNERI A, Libin P, Scalia Tomba G, Faes C, et al
    On realized serial and generation intervals given control measures: The COVID-19 pandemic case.
    PLoS Comput Biol. 2021;17:e1008892.
    PubMed     Abstract available
    
    
    February 2021
16. FISCON G, Conte F, Farina L, Paci P, et al
    SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19.
    PLoS Comput Biol. 2021;17:e1008686.
    PubMed     Abstract available
    
    
    
17. BRACHER J, Ray EL, Gneiting T, Reich NG, et al
    Evaluating epidemic forecasts in an interval format.
    PLoS Comput Biol. 2021;17:e1008618.
    PubMed     Abstract available
    
    
    
18. DATTNER I, Goldberg Y, Katriel G, Yaari R, et al
    The role of children in the spread of COVID-19: Using household data from Bnei Brak, Israel, to estimate the relative susceptibility and infectivity of children.
    PLoS Comput Biol. 2021;17:e1008559.
    PubMed     Abstract available
    
    
    
19. NANDE A, Adlam B, Sheen J, Levy MZ, et al
    Dynamics of COVID-19 under social distancing measures are driven by transmission network structure.
    PLoS Comput Biol. 2021;17:e1008684.
    PubMed     Abstract available
    
    
    
20. TREVEIL A, Bohar B, Sudhakar P, Gul L, et al
    ViralLink: An integrated workflow to investigate the effect of SARS-CoV-2 on intracellular signalling and regulatory pathways.
    PLoS Comput Biol. 2021;17:e1008685.
    PubMed     Abstract available
    
    
    
21. BOUMAN JA, Riou J, Bonhoeffer S, Regoes RR, et al
    Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches.
    PLoS Comput Biol. 2021;17:e1008728.
    PubMed     Abstract available
    
    
    January 2021
22. LEE BY, Bartsch SM, Ferguson MC, Wedlock PT, et al
    The value of decreasing the duration of the infectious period of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.
    PLoS Comput Biol. 2021;17:e1008470.
    PubMed     Abstract available
    
    
    
23. KEELING MJ, Hill EM, Gorsich EE, Penman B, et al
    Predictions of COVID-19 dynamics in the UK: Short-term forecasting and analysis of potential exit strategies.
    PLoS Comput Biol. 2021;17:e1008619.
    PubMed     Abstract available
    
    
    
24. TEPEKULE B, Hauser A, Kachalov VN, Andresen S, et al
    Assessing the potential impact of transmission during prolonged viral shedding on the effect of lockdown relaxation on COVID-19.
    PLoS Comput Biol. 2021;17:e1008609.
    PubMed     Abstract available
    
    
    
25. KOYAMA S, Horie T, Shinomoto S
    Estimating the time-varying reproduction number of COVID-19 with a state-space method.
    PLoS Comput Biol. 2021;17:e1008679.
    PubMed     Abstract available
    
    
    
26. BIN M, Cheung PYK, Crisostomi E, Ferraro P, et al
    Post-lockdown abatement of COVID-19 by fast periodic switching.
    PLoS Comput Biol. 2021;17:e1008604.
    PubMed     Abstract available
    
    
    
27. OMAR SI, Zhao M, Sekar RV, Moghadam SA, et al
    Modeling the structure of the frameshift-stimulatory pseudoknot in SARS-CoV-2 reveals multiple possible conformers.
    PLoS Comput Biol. 2021;17:e1008603.
    PubMed     Abstract available
    
    
    
28. SHARKER Y, Kenah E
    Estimating and interpreting secondary attack risk: Binomial considered biased.
    PLoS Comput Biol. 2021;17:e1008601.
    PubMed     Abstract available
    
    
    December 2020
29. GOSTIC KM, McGough L, Baskerville EB, Abbott S, et al
    Practical considerations for measuring the effective reproductive number, Rt.
    PLoS Comput Biol. 2020;16:e1008409.
    PubMed     Abstract available
    
    
    
30. CATALA M, Alonso S, Alvarez-Lacalle E, Lopez D, et al
    Empirical model for short-time prediction of COVID-19 spreading.
    PLoS Comput Biol. 2020;16:e1008431.
    PubMed     Abstract available
    
    
    
31. RODRIGUES JPGLM, Barrera-Vilarmau S, M C Teixeira J, Sorokina M, et al
    Insights on cross-species transmission of SARS-CoV-2 from structural modeling.
    PLoS Comput Biol. 2020;16:e1008449.
    PubMed     Abstract available
    
    
    
32. ANDERSON SC, Edwards AM, Yerlanov M, Mulberry N, et al
    Quantifying the impact of COVID-19 control measures using a Bayesian model of physical distancing.
    PLoS Comput Biol. 2020;16:e1008274.
    PubMed     Abstract available
    
    
    
33. ZHANG H, Yang Y, Li J, Wang M, et al
    A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro.
    PLoS Comput Biol. 2020;16:e1008489.
    PubMed     Abstract available
    
    
    
34. RICH S, Diaconescu AO, Griffiths JD, Lankarany M, et al
    Ten simple rules for creating a brand-new virtual academic meeting (even amid a pandemic).
    PLoS Comput Biol. 2020;16:e1008485.
    PubMed     Abstract available
    
    
    
35. PADMANABHAN P, Desikan R, Dixit NM
    Targeting TMPRSS2 and Cathepsin B/L together may be synergistic against SARS-CoV-2 infection.
    PLoS Comput Biol. 2020;16:e1008461.
    PubMed     Abstract available
    
    
    
36. DELGADO BLANCO J, Hernandez-Alias X, Cianferoni D, Serrano L, et al
    In silico mutagenesis of human ACE2 with S protein and translational efficiency explain SARS-CoV-2 infectivity in different species.
    PLoS Comput Biol. 2020;16:e1008450.
    PubMed     Abstract available
    
    
    
37. SEGO TJ, Aponte-Serrano JO, Ferrari Gianlupi J, Heaps SR, et al
    A modular framework for multiscale, multicellular, spatiotemporal modeling of acute primary viral infection and immune response in epithelial tissues and its application to drug therapy timing and effectiveness.
    PLoS Comput Biol. 2020;16:e1008451.
    PubMed     Abstract available
    
    
    
38. LIU QH, Bento AI, Yang K, Zhang H, et al
    The COVID-19 outbreak in Sichuan, China: Epidemiology and impact of interventions.
    PLoS Comput Biol. 2020;16:e1008467.
    PubMed     Abstract available
    
    
    November 2020
39. LEUBA SI, Yaesoubi R, Antillon M, Cohen T, et al
    Tracking and predicting U.S. influenza activity with a real-time surveillance network.
    PLoS Comput Biol. 2020;16:e1008180.
    PubMed     Abstract available
    
    
    
40. QUIROUETTE C, Younis NP, Reddy MB, Beauchemin CAA, et al
    Correction: A mathematical model describing the localization and spread of influenza A virus infection within the human respiratory tract.
    PLoS Comput Biol. 2020;16:e1008424.
    PubMed     Abstract available
    
    
    
41. RILLIG MC, Bielcik M, Chaudhary VB, Grunfeld L, et al
    Ten simple rules for increased lab resilience.
    PLoS Comput Biol. 2020;16:e1008313.
    PubMed     Abstract available
    
    
    October 2020
42. PEI S, Shaman J
    Aggregating forecasts of multiple respiratory pathogens supports more accurate forecasting of influenza-like illness.
    PLoS Comput Biol. 2020;16:e1008301.
    PubMed     Abstract available
    
    
    
43. KRAMER SC, Pei S, Shaman J
    Forecasting influenza in Europe using a metapopulation model incorporating cross-border commuting and air travel.
    PLoS Comput Biol. 2020;16:e1008233.
    PubMed     Abstract available
    
    
    
44. HILL EM, Petrou S, Forster H, de Lusignan S, et al
    Optimising age coverage of seasonal influenza vaccination in England: A mathematical and health economic evaluation.
    PLoS Comput Biol. 2020;16:e1008278.
    PubMed     Abstract available
    
    
    
45. NORDMANN E, Horlin C, Hutchison J, Murray JA, et al
    Ten simple rules for supporting a temporary online pivot in higher education.
    PLoS Comput Biol. 2020;16:e1008242.
    PubMed     Abstract available
    
    
    
46. SADRIA M, Layton AT
    Use of Angiotensin-Converting Enzyme Inhibitors and Angiotensin II Receptor Blockers During the COVID-19 Pandemic: A Modeling Analysis.
    PLoS Comput Biol. 2020;16:e1008235.
    PubMed     Abstract available
    
    
    
47. HOLLINGSWORTH B, Okamoto KW, Lloyd AL
    After the honeymoon, the divorce: Unexpected outcomes of disease control measures against endemic infections.
    PLoS Comput Biol. 2020;16:e1008292.
    PubMed     Abstract available
    
    
    
48. MCCOMBS A, Kadelka C
    A model-based evaluation of the efficacy of COVID-19 social distancing, testing and hospital triage policies.
    PLoS Comput Biol. 2020;16:e1008388.
    PubMed     Abstract available
    
    
    
49. KREEGER PK, Brock A, Gibbs HC, Grande-Allen KJ, et al
    Ten simple rules for women principal investigators during a pandemic.
    PLoS Comput Biol. 2020;16:e1008370.
    PubMed    
    
    
    
50. KARCHER MD, Carvalho LM, Suchard MA, Dudas G, et al
    Estimating effective population size changes from preferentially sampled genetic sequences.
    PLoS Comput Biol. 2020;16:e1007774.
    PubMed     Abstract available
    
    
    September 2020
51. ZHAO Z, Sokhansanj BA, Malhotra C, Zheng K, et al
    Genetic grouping of SARS-CoV-2 coronavirus sequences using informative subtype markers for pandemic spread visualization.
    PLoS Comput Biol. 2020;16:e1008269.
    PubMed     Abstract available
    
    
    
52. POLITANO G, Benso A
    IL6-mediated HCoV-host interactome regulatory network and GO/Pathway enrichment analysis.
    PLoS Comput Biol. 2020;16:e1008238.
    PubMed     Abstract available
    
    
    July 2020
53. SCARPINO SV, Scott JG, Eggo RM, Clements B, et al
    Socioeconomic bias in influenza surveillance.
    PLoS Comput Biol. 2020;16:e1007941.
    PubMed     Abstract available
    
    
    
54. HILTON J, Keeling MJ
    Estimation of country-level basic reproductive ratios for novel Coronavirus (SARS-CoV-2/COVID-19) using synthetic contact matrices.
    PLoS Comput Biol. 2020;16:e1008031.
    PubMed     Abstract available
    
    
    
55. PARAG KV, Donnelly CA
    Using information theory to optimise epidemic models for real-time prediction and estimation.
    PLoS Comput Biol. 2020;16:e1007990.
    PubMed     Abstract available
    
    
    
56. BUCUR D, Holme P
    Beyond ranking nodes: Predicting epidemic outbreak sizes by network centralities.
    PLoS Comput Biol. 2020;16:e1008052.
    PubMed     Abstract available
    
    
    June 2020
57. YANG W, Lau EHY, Cowling BJ
    Dynamic interactions of influenza viruses in Hong Kong during 1998-2018.
    PLoS Comput Biol. 2020;16:e1007989.
    PubMed     Abstract available
    
    
    
58. SAAD-ROY CM, Arinaminpathy N, Wingreen NS, Levin SA, et al
    Implications of localized charge for human influenza A H1N1 hemagglutinin evolution: Insights from deep mutational scans.
    PLoS Comput Biol. 2020;16:e1007892.
    PubMed     Abstract available
    
    
    
59. DUVIGNEAU S, Durr R, Laske T, Bachmann M, et al
    Model-based approach for predicting the impact of genetic modifications on product yield in biopharmaceutical manufacturing-Application to influenza vaccine production.
    PLoS Comput Biol. 2020;16:e1007810.
    PubMed     Abstract available
    
    
    May 2020
60. WANG TE, Chao TL, Tsai HT, Lin PH, et al
    Differentiation of Cytopathic Effects (CPE) induced by influenza virus infection using deep Convolutional Neural Networks (CNN).
    PLoS Comput Biol. 2020;16:e1007883.
    PubMed     Abstract available
    
    
    
61. GOZZI N, Perrotta D, Paolotti D, Perra N, et al
    Towards a data-driven characterization of behavioral changes induced by the seasonal flu.
    PLoS Comput Biol. 2020;16:e1007879.
    PubMed     Abstract available
    
    
    April 2020
62. QUIROUETTE C, Younis NP, Reddy MB, Beauchemin CAA, et al
    A mathematical model describing the localization and spread of influenza A virus infection within the human respiratory tract.
    PLoS Comput Biol. 2020;16:e1007705.
    PubMed     Abstract available
    
    
    
63. MCGOUGH SF, Johansson MA, Lipsitch M, Menzies NA, et al
    Nowcasting by Bayesian Smoothing: A flexible, generalizable model for real-time epidemic tracking.
    PLoS Comput Biol. 2020;16:e1007735.
    PubMed     Abstract available
    
    
    February 2020
64. CASTRO LA, Bedford T, Ancel Meyers L
    Early prediction of antigenic transitions for influenza A/H3N2.
    PLoS Comput Biol. 2020;16:e1007683.
    PubMed     Abstract available
    
    
    
65. REIMERING S, Munoz S, McHardy AC
    Phylogeographic reconstruction using air transportation data and its application to the 2009 H1N1 influenza A pandemic.
    PLoS Comput Biol. 2020;16:e1007101.
    PubMed     Abstract available
    
    
    December 2019
66. ENDO A, Uchida M, Kucharski AJ, Funk S, et al
    Fine-scale family structure shapes influenza transmission risk in households: Insights from primary schools in Matsumoto city, 2014/15.
    PLoS Comput Biol. 2019;15:e1007589.
    PubMed     Abstract available
    
    
    November 2019
67. REICH NG, McGowan CJ, Yamana TK, Tushar A, et al
    Accuracy of real-time multi-model ensemble forecasts for seasonal influenza in the U.S.
    PLoS Comput Biol. 2019;15:e1007486.
    PubMed     Abstract available
    
    
    
68. RANGARAJAN P, Mody SK, Marathe M
    Forecasting dengue and influenza incidences using a sparse representation of Google trends, electronic health records, and time series data.
    PLoS Comput Biol. 2019;15:e1007518.
    PubMed     Abstract available
    
    
    October 2019
69. HILL EM, Petrou S, de Lusignan S, Yonova I, et al
    Seasonal influenza: Modelling approaches to capture immunity propagation.
    PLoS Comput Biol. 2019;15:e1007096.
    PubMed     Abstract available
    
    
    
70. PRIEDHORSKY R, Daughton AR, Barnard M, O'Connell F, et al
    Estimating influenza incidence using search query deceptiveness and generalized ridge regression.
    PLoS Comput Biol. 2019;15:e1007165.
    PubMed     Abstract available
    
    
    September 2019
71. VENKATRAMANAN S, Chen J, Fadikar A, Gupta S, et al
    Optimizing spatial allocation of seasonal influenza vaccine under temporal constraints.
    PLoS Comput Biol. 2019;15:e1007111.
    PubMed     Abstract available
    
    
    
72. BECKER AD, Wesolowski A, Bjornstad ON, Grenfell BT, et al
    Long-term dynamics of measles in London: Titrating the impact of wars, the 1918 pandemic, and vaccination.
    PLoS Comput Biol. 2019;15:e1007305.
    PubMed     Abstract available
    
    
    August 2019
73. HAY JA, Laurie K, White M, Riley S, et al
    Characterising antibody kinetics from multiple influenza infection and vaccination events in ferrets.
    PLoS Comput Biol. 2019;15:e1007294.
    PubMed     Abstract available
    
    
    
74. YANG J, Muller NF, Bouckaert R, Xu B, et al
    Bayesian phylodynamics of avian influenza A virus H9N2 in Asia with time-dependent predictors of migration.
    PLoS Comput Biol. 2019;15:e1007189.
    PubMed     Abstract available
    
    
    
75. KANDULA S, Shaman J
    Reappraising the utility of Google Flu Trends.
    PLoS Comput Biol. 2019;15:e1007258.
    PubMed     Abstract available
    
    
    May 2019
76. BEN-NUN M, Riley P, Turtle J, Bacon DP, et al
    Forecasting national and regional influenza-like illness for the USA.
    PLoS Comput Biol. 2019;15:e1007013.
    PubMed     Abstract available
    
    
    April 2019
77. LASKE T, Bachmann M, Dostert M, Karlas A, et al
    Model-based analysis of influenza A virus replication in genetically engineered cell lines elucidates the impact of host cell factors on key kinetic parameters of virus growth.
    PLoS Comput Biol. 2019;15:e1006944.
    PubMed     Abstract available
    
    
    
78. KALIMERI K, Delfino M, Cattuto C, Perrotta D, et al
    Unsupervised extraction of epidemic syndromes from participatory influenza surveillance self-reported symptoms.
    PLoS Comput Biol. 2019;15:e1006173.
    PubMed     Abstract available
    
    
    
79. MENG H, Yaari G, Bolen CR, Avey S, et al
    Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).
    PLoS Comput Biol. 2019;15:e1006899.
    PubMed     Abstract available
    
    
    February 2019
80. KRAMER SC, Shaman J
    Development and validation of influenza forecasting for 64 temperate and tropical countries.
    PLoS Comput Biol. 2019;15:e1006742.
    PubMed     Abstract available
    
    
    
81. RUDIGER D, Kupke SY, Laske T, Zmora P, et al
    Multiscale modeling of influenza A virus replication in cell cultures predicts infection dynamics for highly different infection conditions.
    PLoS Comput Biol. 2019;15:e1006819.
    PubMed     Abstract available
    
    
    
82. OSTHUS D, Daughton AR, Priedhorsky R
    Even a good influenza forecasting model can benefit from internet-based nowcasts, but those benefits are limited.
    PLoS Comput Biol. 2019;15:e1006599.
    PubMed     Abstract available
    
    
    
83. PEI S, Cane MA, Shaman J
    Predictability in process-based ensemble forecast of influenza.
    PLoS Comput Biol. 2019;15:e1006783.
    PubMed     Abstract available
    
    
    January 2019
84. MAJARIAN TD, Murphy RF, Lakdawala SS
    Learning the sequence of influenza A genome assembly during viral replication using point process models and fluorescence in situ hybridization.
    PLoS Comput Biol. 2019;15:e1006199.
    PubMed     Abstract available
    
    
    
85. YAN AWC, Zaloumis SG, Simpson JA, McCaw JM, et al
    Sequential infection experiments for quantifying innate and adaptive immunity during influenza infection.
    PLoS Comput Biol. 2019;15:e1006568.
    PubMed     Abstract available
    
    
    
86. HAW DJ, Cummings DAT, Lessler J, Salje H, et al
    Differential mobility and local variation in infection attack rate.
    PLoS Comput Biol. 2019;15:e1006600.
    PubMed     Abstract available
    
    
    November 2018
87. VOLZ EM, Siveroni I
    Bayesian phylodynamic inference with complex models.
    PLoS Comput Biol. 2018;14:e1006546.
    PubMed     Abstract available
    
    
    October 2018
88. CHAKRABORTY P, Lewis B, Eubank S, Brownstein JS, et al
    What to know before forecasting the flu.
    PLoS Comput Biol. 2018;14:e1005964.
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    September 2018
89. HILL EM, House T, Dhingra MS, Kalpravidh W, et al
    The impact of surveillance and control on highly pathogenic avian influenza outbreaks in poultry in Dhaka division, Bangladesh.
    PLoS Comput Biol. 2018;14:e1006439.
    PubMed     Abstract available
    
    
    
90. ERTEM Z, Raymond D, Meyers LA
    Optimal multi-source forecasting of seasonal influenza.
    PLoS Comput Biol. 2018;14:e1006236.
    PubMed     Abstract available
    
    
    August 2018
91. COPE RC, Ross JV, Chilver M, Stocks NP, et al
    Characterising seasonal influenza epidemiology using primary care surveillance data.
    PLoS Comput Biol. 2018;14:e1006377.
    PubMed     Abstract available
    
    
    June 2018
92. BROOKS LC, Farrow DC, Hyun S, Tibshirani RJ, et al
    Nonmechanistic forecasts of seasonal influenza with iterative one-week-ahead distributions.
    PLoS Comput Biol. 2018;14:e1006134.
    PubMed     Abstract available
    
    
    March 2018
93. SAMBATURU N, Mukherjee S, Lopez-Garcia M, Molina-Paris C, et al
    Role of genetic heterogeneity in determining the epidemiological severity of H1N1 influenza.
    PLoS Comput Biol. 2018;14:e1006069.
    PubMed     Abstract available
    
    
    
94. LEE EC, Arab A, Goldlust SM, Viboud C, et al
    Deploying digital health data to optimize influenza surveillance at national and local scales.
    PLoS Comput Biol. 2018;14:e1006020.
    PubMed     Abstract available
    
    
    February 2018
95. THOMPSON RN, Gilligan CA, Cunniffe NJ
    Control fast or control smart: When should invading pathogens be controlled?
    PLoS Comput Biol. 2018;14:e1006014.
    PubMed     Abstract available
    
    
    
96. RAY EL, Reich NG
    Prediction of infectious disease epidemics via weighted density ensembles.
    PLoS Comput Biol. 2018;14:e1005910.
    PubMed     Abstract available
    
    
    November 2017
97. SHAMAN J, Kandula S, Yang W, Karspeck A, et al
    The use of ambient humidity conditions to improve influenza forecast.
    PLoS Comput Biol. 2017;13:e1005844.
    PubMed     Abstract available
    
    
    
98. YAMANA TK, Kandula S, Shaman J
    Individual versus superensemble forecasts of seasonal influenza outbreaks in the United States.
    PLoS Comput Biol. 2017;13:e1005801.
    PubMed     Abstract available
    
    
    
99. VAN LEEUWEN E, Klepac P, Thorrington D, Pebody R, et al
    fluEvidenceSynthesis: An R package for evidence synthesis based analysis of epidemiological outbreaks.
    PLoS Comput Biol. 2017;13:e1005838.
    PubMed     Abstract available
    
    
    October 2017
100. FOX SJ, Miller JC, Meyers LA
     Seasonality in risk of pandemic influenza emergence.
     PLoS Comput Biol. 2017;13:e1005749.
     PubMed     Abstract available
     
     
     June 2017
101. DORRATOLTAJ N, Marathe A, Lewis BL, Swarup S, et al
     Epidemiological and economic impact of pandemic influenza in Chicago: Priorities for vaccine interventions.
     PLoS Comput Biol. 2017;13:e1005521.
     PubMed     Abstract available
     
     
     February 2017
102. CHARU V, Zeger S, Gog J, Bjornstad ON, et al
     Human mobility and the spatial transmission of influenza in the United States.
     PLoS Comput Biol. 2017;13:e1005382.
     PubMed     Abstract available
     
     
     
103. MAGEE D, Suchard MA, Scotch M
     Bayesian phylogeography of influenza A/H3N2 for the 2014-15 season in the United States using three frameworks of ancestral state reconstruction.
     PLoS Comput Biol. 2017;13:e1005389.
     PubMed     Abstract available
     
     
     
104. WON M, Marques-Pita M, Louro C, Goncalves-Sa J, et al
     Early and Real-Time Detection of Seasonal Influenza Onset.
     PLoS Comput Biol. 2017;13:e1005330.
     PubMed     Abstract available
     
     
     December 2016
105. SUBRAMANIAN R, Graham AL, Grenfell BT, Arinaminpathy N, et al
     Universal or Specific? A Modeling-Based Comparison of Broad-Spectrum Influenza Vaccines against Conventional, Strain-Matched Vaccines.
     PLoS Comput Biol. 2016;12:e1005204.
     PubMed     Abstract available
     
     
     November 2016
106. YANG W, Olson DR, Shaman J
     Forecasting Influenza Outbreaks in Boroughs and Neighborhoods of New York City.
     PLoS Comput Biol. 2016;12:e1005201.
     PubMed     Abstract available
     
     
     October 2016
107. SCHELKER M, Mair CM, Jolmes F, Welke RW, et al
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