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Breast Cancer

Free Subscription Articles published in PLoS Comput Biol Retrieve available abstracts of 21 articles: HTML format

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March 2026
1. VEITH T, Beck RJ, Brown JS, Andor N, et al
   Inverse game theory characterizes frequency-dependent selection driven by karyotypic diversity in triple negative breast cancer.
   PLoS Comput Biol. 2026;22:e1013897.
   PubMed     Abstract available
   
   
   
2. HUO X, Duan X, Huang X, Xue L, et al
   An integrative analysis reveals the mechanism of plastic stabilizers inducing breast cancer.
   PLoS Comput Biol. 2026;22:e1014025.
   PubMed     Abstract available
   
   
   February 2026
3. WANG Y, Zang C, Li Z, Guo CC, et al
   A comparative study of statistical methods for identifying differentially expressed genes in spatial transcriptomics.
   PLoS Comput Biol. 2026;22:e1013956.
   PubMed     Abstract available
   
   
   January 2026
4. JI T, Yang B, Wang M, Ji H, et al
   AugGCL: Multimodal graph learning for spatial transcriptomics analysis with enhanced gene and morphological data.
   PLoS Comput Biol. 2026;22:e1013912.
   PubMed     Abstract available
   
   
   December 2025
5. HAN C, Song Z, Xu Z, Chen J, et al
   MAGNET: Multi-view graph autoencoder with cell-gene attention for cell interaction network reconstruction from spatial transcriptomics.
   PLoS Comput Biol. 2025;21:e1013810.
   PubMed     Abstract available
   
   
   November 2025
6. FAHMI NA, Cheng S, Overstreet J, Song Q, et al
   IPScan: Detecting novel intronic PolyAdenylation events with RNA-seq data.
   PLoS Comput Biol. 2025;21:e1013668.
   PubMed     Abstract available
   
   
   October 2025
7. MATACHE A, Lima-Junior JR, Kuznetsov M, Urbaniak K, et al
   Ligand discrimination in immune cells: Signal processing insights into immune dysfunction in ER+ breast cancer.
   PLoS Comput Biol. 2025;21:e1013615.
   PubMed     Abstract available
   
   
   September 2025
8. NOUIRA A, Azencott CA
   Sparse multitask group Lasso for genome-wide association studies.
   PLoS Comput Biol. 2025;21:e1012734.
   PubMed     Abstract available
   
   
   August 2025
9. YAVUZ BR, Sahin U, Jang H, Nussinov R, et al
   Mutations in tumor signaling, metastases, and synthetic lethality establish distinct patterns.
   PLoS Comput Biol. 2025;21:e1013351.
   PubMed     Abstract available
   
   
   May 2025
10. HOPFL S, Ozverin M, Nowack H, Tamas R, et al
    Integrated mathematical and experimental modeling uncovers enhanced EMT plasticity upon loss of the DLC1 tumor suppressor.
    PLoS Comput Biol. 2025;21:e1013076.
    PubMed     Abstract available
    
    
    April 2025
11. NOURBAKHSH M, Zheng Y, Noor H, Chen H, et al
    Revealing cancer driver genes through integrative transcriptomic and epigenomic analyses with Moonlight.
    PLoS Comput Biol. 2025;21:e1012999.
    PubMed     Abstract available
    
    
    February 2025
12. SAKAI SA, Nomura R, Nagasawa S, Chi S, et al
    SpatialKNifeY (SKNY): Extending from spatial domain to surrounding area to identify microenvironment features with single-cell spatial omics data.
    PLoS Comput Biol. 2025;21:e1012854.
    PubMed     Abstract available
    
    
    
13. ZHAN X, Xu Q, Zheng Y, Lu G, et al
    Reliability-enhanced data cleaning in biomedical machine learning using inductive conformal prediction.
    PLoS Comput Biol. 2025;21:e1012803.
    PubMed     Abstract available
    
    
    January 2025
14. SHI X, Wang X, Jin L, Halakivi-Clarke L, et al
    Bayesian identification of differentially expressed isoforms using a novel joint model of RNA-seq data.
    PLoS Comput Biol. 2025;21:e1012750.
    PubMed     Abstract available
    
    
    November 2024
15. HUANG HY, Zhang FW, Yu J, Xiao YH, et al
    A computational analysis of the oncogenic and anti-tumor immunity role of P4HA3 in human cancers.
    PLoS Comput Biol. 2024;20:e1012284.
    PubMed     Abstract available
    
    
    October 2024
16. CHEN L, Huang ZH, Sun Y, Domaratzki M, et al
    Conditional probabilistic diffusion model driven synthetic radiogenomic applications in breast cancer.
    PLoS Comput Biol. 2024;20:e1012490.
    PubMed     Abstract available
    
    
    June 2024
17. XIE X, Sinha S
    Quantitative estimates of the regulatory influence of long non-coding RNAs on global gene expression variation using TCGA breast cancer transcriptomic data.
    PLoS Comput Biol. 2024;20:e1012103.
    PubMed     Abstract available
    
    
    
18. VANDERDOES J, Marceaux C, Yokote K, Asselin-Labat ML, et al
    Using random forests to uncover the predictive power of distance-varying cell interactions in tumor microenvironments.
    PLoS Comput Biol. 2024;20:e1011361.
    PubMed     Abstract available
    
    
    
19. DIMITRIOU NM, Flores-Torres S, Kyriakidou M, Kinsella JM, et al
    Cancer cell sedimentation in 3D cultures reveals active migration regulated by self-generated gradients and adhesion sites.
    PLoS Comput Biol. 2024;20:e1012112.
    PubMed     Abstract available
    
    
    
20. PERRONE MC, Lerner MG, Dunworth M, Ewald AJ, et al
    Prioritizing drug targets by perturbing biological network response functions.
    PLoS Comput Biol. 2024;20:e1012195.
    PubMed     Abstract available
    
    
    May 2024
21. BENZEKRY S, Mastri M, Nicolo C, Ebos JML, et al
    Machine-learning and mechanistic modeling of metastatic breast cancer after neoadjuvant treatment.
    PLoS Comput Biol. 2024;20:e1012088.
    PubMed     Abstract available
    
    

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