Crystal structure of full-length Zika virus NS5 protein reveals a conformation similar to Japanese encephalitis virus NS5

Acta Crystallogr F Struct Biol Commun. 2017 Mar 1;73(Pt 3):116-122. doi: 10.1107/S2053230X17001601. Epub 2017 Feb 21.

Abstract

The rapid spread of the recent Zika virus (ZIKV) epidemic across various countries in the American continent poses a major health hazard for the unborn fetuses of pregnant women. To date, there is no effective medical intervention. The nonstructural protein 5 of Zika virus (ZIKV-NS5) is critical for ZIKV replication through the 5'-RNA capping and RNA polymerase activities present in its N-terminal methyltransferase (MTase) and C-terminal RNA-dependent RNA polymerase (RdRp) domains, respectively. The crystal structure of the full-length ZIKV-NS5 protein has been determined at 3.05 Å resolution from a crystal belonging to space group P21212 and containing two protein molecules in the asymmetric unit. The structure is similar to that reported for the NS5 protein from Japanese encephalitis virus and suggests opportunities for structure-based drug design targeting either its MTase or RdRp domain.

Keywords: NS5; Zika virus; nonstructural protein 5.

MeSH terms

  • Amino Acid Motifs
  • Binding Sites
  • Cations, Divalent
  • Cloning, Molecular
  • Crystallography, X-Ray
  • Encephalitis Virus, Japanese / chemistry*
  • Encephalitis Virus, Japanese / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Models, Molecular
  • Plasmids / chemistry
  • Plasmids / metabolism
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Protein Conformation, beta-Strand
  • Protein Interaction Domains and Motifs
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Structural Homology, Protein
  • Viral Nonstructural Proteins / chemistry*
  • Viral Nonstructural Proteins / genetics
  • Viral Nonstructural Proteins / metabolism
  • Zika Virus / chemistry*
  • Zika Virus / metabolism
  • Zinc / chemistry*
  • Zinc / metabolism

Substances

  • Cations, Divalent
  • NS5 protein, flavivirus
  • Recombinant Proteins
  • Viral Nonstructural Proteins
  • Zinc