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	The Medical Article of the Year 2008: Wellcome Trust Case Control Consortium. Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 2007; 447:661-78. Free full-text

Bacterial Infections and Mycoses

Free Subscription Articles published in J Clin Microbiol Retrieve available abstracts of 663 articles: HTML format

Single Articles

July 2008
1. YUSOF A , Engelhardt A, Karlsson A, Bylund L, et al
   Evaluation of a New Etest Vancomycin + Teicoplanin Strip for Detection of Glycopeptide Intermediate Staphylococcus aureus (GISA) and heterogeneous GISA.
   J Clin Microbiol. 2008;.
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2. SAXENA D , Caufield PW, Li Y, Brown S, et al
   Genetic Classification of Severe Early Childhood Caries Using Subtracted DNA Fragments from Streptococcus mutans.
   J Clin Microbiol. 2008;.
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3. LALANI T , Federspiel JJ, Boucher HW, Rude TH, et al
   Associations between the Genotype of Staphylococcus aureus Bloodstream Isolates and the Clinical Characteristics and Outcomes of Bacteremic Patients.
   J Clin Microbiol. 2008;.
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4. PARK IJ , Lee WG, Shin JH, Lee KW, et al
   VanB phenotype-vanA genotype Enterococcus faecium with heterogeneous expression of teicoplanin resistance.
   J Clin Microbiol. 2008;.
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5. D'MELLO D , Daley AJ, Rahman MS, Qu Y, et al
   Vancomycin heteroresistance of Staphylococcus capitis bloodstream isolates.
   J Clin Microbiol. 2008;.
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6. FENG JY , Su WJ, Tsai CC, Chang SC, et al
   Clinical Impact of Mycobacterium Tuberculosis W-Beijing Genotype Strain on Aged Patients in Taiwan.
   J Clin Microbiol. 2008;.
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   June 2008
7. PFALLER MA , Diekema DJ, Ostrosky-Zeichner L, Rex JH, et al
   Correlation of MIC with Outcome for Candida species Tested against Caspofungin, Anidulafungin, and Micafungin: Analysis and Proposal for Interpretive MIC Breakpoints.
   J Clin Microbiol. 2008;.
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8. PATINO S , Alamo L, Cimino M, Casart Y, et al
   Autofluorescence of mycobacteria as a tool for the detection of Mycobacterium tuberculosis.
   J Clin Microbiol. 2008;.
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9. PETERSEN A , Chadfield MS, Christensen JP, Christensen H, et al
   Characterization of small colony variants of Enterococcus faecalis isolated from chickens with amyloid arthropathy.
   J Clin Microbiol. 2008;.
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10. RUBIN LG , Rizvi A, Baer A
    Effect of swab composition and use of swab or STGG-containing swab on culture or PCR-based detection of Streptococcus pneumoniae from simulated and clinical respiratory specimens in STGG transport medium.
    J Clin Microbiol. 2008;.
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11. TAVARES A , Inacio J, Melo-Cristino J, Couto I, et al
    The use of Fluorescence in situ Hybridization (FISH) for the rapid identification of staphylococci in blood cultures in a Portuguese hospital.
    J Clin Microbiol. 2008;.
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12. HARRIS KA , Turner P, Green EA, Hartley JC, et al
    A duplex real-time PCR assay for the detection, and determination of penicillin susceptibility, of Streptococcus pneumoniae in clinical samples.
    J Clin Microbiol. 2008;.
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13. LOCKHART SR , Messer SA, Pfaller MA, Diekema DJ, et al
    Geographic distribution and antifungal susceptibility of the newly described species Candida orthopsilosis and Candida metapsilosis, in comparison to the closely-related species Candida parapsilosis.
    J Clin Microbiol. 2008;.
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14. PFALLER MA , Messer SA, Boyken L, Rice C, et al
    In Vitro Survey of Triazole Cross-Resistance Among More Than 700 Clinical Isolates of Aspergillus species.
    J Clin Microbiol. 2008;.
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15. KONG F , Lambertsen LM, Slotved HC, Ko D, et al
    Use of phenotypic and molecular serotype identification methods to characterise previously non-serotypeable group B streptococci (GBS).
    J Clin Microbiol. 2008;.
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16. ALLIX-BEGUEC C , Harmsen D, Weniger T, Supply P, et al
    Evaluation and user-strategy of MIRU-VNTRplus, a multifunctional database for on-line analysis of genotyping data and phylogenetic identification of Mycobacterium tuberculosis complex isolates.
    J Clin Microbiol. 2008;.
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17. PARSONNET J , Goering RV, Hansmann MA, Jones MB, et al
    Prevalence of TSST-1-Producing Strains of Staphylococcus aureus and Antibody to TSST-1 among Healthy Japanese Women.
    J Clin Microbiol. 2008;.
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18. ROISIN S , Nonhoff C, Denis O, Struelens MJ, et al
    Evaluation of new Vitek 2 card and disk diffusion method for determining susceptibility of Staphylococcus aureus to oxacillin.
    J Clin Microbiol. 2008;.
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19. CHAKRAVORTY S , Aladegbami B, Motiwala AS, Dai Y, et al
    Rifampin-resistance, Beijing-W clade/SNP cluster group two phylogeny and the Rv2629 191-C allele in Mycobacterium tuberculosis strains.
    J Clin Microbiol. 2008;.
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20. VESTRHEIM DF , Hoiby EA, Aaberge IS, Caugant DA, et al
    Phenotypic and Genotypic Characterization of Streptococcus pneumoniae Colonizing Children Attending Day-Care Centres in Norway.
    J Clin Microbiol. 2008;.
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21. CHURCH DL , Baxter H, Lloyd T, Miller B, et al
    Evaluation of StrepB Carrot BrothTM vs. LIM Broth for the Detection of Group B Streptococcus (GBS) Colonization Status of Near-Term Pregnant Women.
    J Clin Microbiol. 2008;.
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22. MELLMANN A , Weniger T, Berssenbrugge C, Keckevoet U, et al
    Characterization of the Clonal Relatedness among the Natural Population of Staphylococcus aureus Using spa Sequence Typing and the BURP Algorithm.
    J Clin Microbiol. 2008;.
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23. ADEYEMI OA , Qi C, Zembower TR, Ison MG, et al
    Invasive Infections with Community-Associated Methicillin-Resistant Staphylococcus aureus After Kidney Transplantation.
    J Clin Microbiol. 2008;.
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    May 2008
24. ABE C , Kobayashi I, Mitarai S, Wada M, et al
    Biological and Molecular Characteristics of Mycobacterium tuberculosis Clinical Isolates with Low-level Resistance to Isoniazid in Japan.
    J Clin Microbiol. 2008;.
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25. PINSKY BA , Banaei N
    A multiplex, real-time PCR assay for rapid identification of Mycobacterium tuberculosis complex members to the species level.
    J Clin Microbiol. 2008;.
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26. CHUA T , Moore CL, Perri MB, Donabedian SM, et al
    Molecular Epidemiology of Methicillin-Resistant Staphylococcus aureus (MRSA) Bloodstream Isolates in Urban Detroit.
    J Clin Microbiol. 2008;.
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27. HO PL , Wong MP, Lai EL, Chan KH, et al
    DNA typing of cytological samples for retrospective identification of an early case of Panton-Valentine leukocidin positive, community-associated methicillin-resistant Staphylococcus aureus pneumonia.
    J Clin Microbiol. 2008;.
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28. ZHOU X , Kong F, Sorrell TC, Wang H, et al
    A practical method for detection and identification of Candida, Aspergillus and Scedosporium using rolling circle amplification (RCA).
    J Clin Microbiol. 2008;.
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29. RICHTER SS , Heilmann KP, Dohrn CL, Riahi F, et al
    Accuracy of Phenotypic Methods for the Identification of Streptococcus pneumoniae Isolates Included in Surveillance Programs.
    J Clin Microbiol. 2008;.
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30. CHARALAMBOUS BM , Oriyo NM, Gillespie SH
    How valid is single colony isolation for surveillance of Streptococcus pneumoniae carriage?
    J Clin Microbiol. 2008;.
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31. TAN TY , Ng SY, He J
    Microbiological characteristics, presumptive identification and antibiotic susceptibilities of Staphylococcus lugdunensis.
    J Clin Microbiol. 2008;.
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32. CARVER PL , Lin SW, Depestel DD, Newton DW, et al
    The Impact of mecA Gene Testing and Infectious Diseases Pharmacists' Intervention on the Time to Optimal Antimicrobial Therapy for Staphylococcus aureus Bacteremia at a University Hospital.
    J Clin Microbiol. 2008;.
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33. LAZZARINI LC , Spindola SM, Bang H, Gibson AL, et al
    RDRio Mycobacterium tuberculosis Infection Is Associated With A Higher Frequency of Cavitary Pulmonary Disease.
    J Clin Microbiol. 2008;.
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34. NULENS E , Stobberingh EE, van Dessel H, Sebastian S, et al
    Molecular Characterization of Staphylococcus aureus Bloodstream Isolates in a Dutch University Hospital between 1999 and 2006.
    J Clin Microbiol. 2008;.
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35. CUZON G , Naas T, Fortineau N, Nordmann P, et al
    A Novel Chromogenic Medium for Detection of Vancomycin-Resistant Enterococcus faecium and Enterococcus faecalis.
    J Clin Microbiol. 2008;.
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36. LAMAGNI TL , Darenberg J, Luca-Harari B, Siljander T, et al
    The epidemiology of severe Streptococcus pyogenes disease in Europe.
    J Clin Microbiol. 2008;.
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37. FUKUSHIMA KY , Yanagihara K, Hirakata Y, Sugahara K, et al
    Rapid Identification of Penicillin and Macrolide Resistance Genes and Simultaneous Quantification of Streptococcus pneumoniae in Purulent Sputum Samples Using a Novel Real-time Multiplex PCR Assay.
    J Clin Microbiol. 2008;.
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38. PROCIANOY RS , Silveira RC
    Epidemiology of candidemia.
    J Clin Microbiol. 2008;46:1894.
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39. CURCIO D
    Treatment of recurrent urosepsis with tigecycline: a pharmacological perspective.
    J Clin Microbiol. 2008;46:1892-3.
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40. OCHIAI S , Ishiko H, Yasuda M, Deguchi T, et al
    Rapid detection of the mosaic structure of the Neisseria gonorrhoeae penA Gene, which is associated with decreased susceptibilities to oral cephalosporins.
    J Clin Microbiol. 2008;46:1804-10.
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41. LEVY H , Diallo S, Tennant SM, Livio S, et al
    PCR method to identify Salmonella enterica serovars Typhi, Paratyphi A, and Paratyphi B among Salmonella Isolates from the blood of patients with clinical enteric fever.
    J Clin Microbiol. 2008;46:1861-6.
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42. WATKINS RR , Anthony K, Schroder S, Hall GS, et al
    Ventriculoperitoneal shunt infection caused by Actinomyces neuii subsp. neuii.
    J Clin Microbiol. 2008;46:1888-9.
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43. LIBISCH B , Giske CG, Kovacs B, Toth TG, et al
    Identification of the first VIM metallo-beta-lactamase-producing multiresistant Aeromonas hydrophila strain.
    J Clin Microbiol. 2008;46:1878-80.
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44. CAMERON CE , Zuerner RL, Raverty S, Colegrove KM, et al
    Detection of pathogenic Leptospira bacteria in pinniped populations via PCR and identification of a source of transmission for zoonotic leptospirosis in the marine environment.
    J Clin Microbiol. 2008;46:1728-33.
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45. CADENAS MB , Bradley J, Maggi RG, Takara M, et al
    Molecular characterization of Bartonella vinsonii subsp. berkhoffii genotype III.
    J Clin Microbiol. 2008;46:1858-60.
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46. ANDRE P , Caro V, Njamkepo E, Wendelboe AM, et al
    Comparison of serological and real-time PCR assays to diagnose Bordetella pertussis infection in 2007.
    J Clin Microbiol. 2008;46:1672-7.
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47. WANG SH , Mangino JE, Stevenson K, Yakrus MA, et al
    Characterization of "Mycobacterium paraffinicum" associated with a pseudo-outbreak.
    J Clin Microbiol. 2008;46:1850-3.
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48. LADBURY GA , Stuen S, Thomas R, Bown KJ, et al
    Dynamic transmission of numerous Anaplasma phagocytophilum genotypes among lambs in an infected sheep flock in an area of anaplasmosis endemicity.
    J Clin Microbiol. 2008;46:1686-91.
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49. MOYAERT H , Pasmans F, Ducatelle R, Haesebrouck F, et al
    Evaluation of 16S rRNA gene-based PCR assays for genus-level identification of Helicobacter species.
    J Clin Microbiol. 2008;46:1867-9.
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50. PETERS IR , Helps CR, McAuliffe L, Neimark H, et al
    RNase P RNA gene (rnpB) phylogeny of Hemoplasmas and other Mycoplasma species.
    J Clin Microbiol. 2008;46:1873-7.
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51. ASLANZADEH J , Zheng X, Li H, Tetreault J, et al
    Prospective evaluation of rapid antigen tests for diagnosis of respiratory syncytial virus and human metapneumovirus infections.
    J Clin Microbiol. 2008;46:1682-5.
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52. ESPINEL-INGROFF A , Canton E
    Comparison of Neo-Sensitabs tablet diffusion assay with CLSI broth microdilution M38-A and disk diffusion methods for testing susceptibility of filamentous fungi with amphotericin B, caspofungin, itraconazole, posaconazole, and voriconazole.
    J Clin Microbiol. 2008;46:1793-803.
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53. BAKER S , Holt K, van de Vosse E, Roumagnac P, et al
    High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia.
    J Clin Microbiol. 2008;46:1741-6.
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54. SIMMON KE , Mirrett S, Reller LB, Petti CA, et al
    Genotypic diversity of anaerobic isolates from bloodstream infections.
    J Clin Microbiol. 2008;46:1596-601.
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55. MONCADA J , Donegan E, Schachter J
    Evaluation of CDC-recommended approaches for confirmatory testing of positive Neisseria gonorrhoeae nucleic acid amplification test results.
    J Clin Microbiol. 2008;46:1614-9.
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56. ESPARCIA O , Navarro F, Quer M, Coll P, et al
    Lymphadenopathy caused by Mycobacterium colombiense.
    J Clin Microbiol. 2008;46:1885-7.
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    April 2008
57. BUHLMANN M , Bogli-Stuber K, Droz S, Muhlemann K, et al
    Rapid screening for carriage of Methicillin-resistant Staphylococcus aureus by polymerase chain reaction and associated costs.
    J Clin Microbiol. 2008;.
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58. DESNOS-OLLIVIER M , Dromer F, Dannaoui E
    Detection of caspofungin resistance in Candida spp. by Etest(R).
    J Clin Microbiol. 2008;.
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59. GRANDJEAN L , Martin L, Gilman RH, Valencia T, et al
    Direct Tuberculosis Culture in Selective Broth Without Decontamination or Centrifugation.
    J Clin Microbiol. 2008;.
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60. MEHTA MS , Paule SM, Hacek DM, Thomson RB, et al
    Optimization of the Roche PCR Analyte Specific Reagent Assay for Detection of Staphylococcus aureus, Methicillin-Resistant S. aureus (MRSA) and Vancomycin-Resistant Enterococcus species.
    J Clin Microbiol. 2008;.
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61. GRABSCH EA , Chua K, Xie S, Byrne J, et al
    vanB2 Enterococcus faecium with Vancomycin Susceptible Phenotype - Improved Detection by Etest Using Oxgall Supplementation.
    J Clin Microbiol. 2008;.
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62. SEVERIN JA , Lestari ES, Kuntaman K, Melles DC, et al
    Unusually High Prevalence of Panton-Valentine Leukocidin Genes among Methicillin-Sensitive Staphylococcus aureus carried in the Indonesian Population.
    J Clin Microbiol. 2008;.
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63. CORTES PR , Albarracin Orio AG, Regueira M, Pinas GE, et al
    Characterization of in vitro-generated and clinical optochin-resistant strains of Streptococcus pneumoniae isolated from Argentina.
    J Clin Microbiol. 2008;.
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64. MEISAL R , Hoiby EA, Aaberge IS, Caugant DA, et al
    Sequence Type and emm-Type Diversity in Streptococcus pyogenes Isolates Causing Invasive Disease in Norway between 1988 and 2003.
    J Clin Microbiol. 2008;.
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65. COLLINS J , Buckling A, Massey RC
    The identification of factors contributing to the T-cell toxicity of Staphylococcus aureus clinical isolates.
    J Clin Microbiol. 2008;.
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66. LEVETT PN , Brandt K, Olenius K, Brown C, et al
    Evaluation of three automated nucleic acid amplification systems for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in first void urine specimens.
    J Clin Microbiol. 2008;.
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67. CHEE CB , Gan SH, Khinmar KW, Barkham TM, et al
    SENSITIVITY COMPARISON OF TWO COMMERCIAL INTERFERON-GAMMA RELEASE ASSAYS IN PULMONARY TUBERCULOSIS.
    J Clin Microbiol. 2008;.
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68. PIAU C , Jehan J, Leclercq R, Daurel C, et al
    A Catalase Negative Staphylococcus aureus with Point Mutations in the katA Gene.
    J Clin Microbiol. 2008;.
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69. HUI M , Lam WH, Ho WH, Chan CY, et al
    Endophthalmitis: potential benefits of repeated intravitreal injections of antibiotics.
    J Clin Microbiol. 2008;46:1573.
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70. LI Y , Li Q, Du Y, Jiang X, et al
    Prevalence of plasmid-mediated AmpC beta-lactamases in a Chinese university hospital from 2003 to 2005: first report of CMY-2-Type AmpC beta-lactamase resistance in China.
    J Clin Microbiol. 2008;46:1317-21.
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71. RIEDEL S , Bourbeau P, Swartz B, Brecher S, et al
    Timing of specimen collection for blood cultures from febrile patients with bacteremia.
    J Clin Microbiol. 2008;46:1381-5.
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72. YANG S , Ramachandran P, Hardick A, Hsieh YH, et al
    Rapid PCR-based diagnosis of septic arthritis by early Gram-type classification and pathogen identification.
    J Clin Microbiol. 2008;46:1386-90.
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73. TRNOVSKY J , Merz W, Della-Latta P, Wu F, et al
    Rapid and accurate identification of Candida albicans isolates by use of PNA FISHFlow.
    J Clin Microbiol. 2008;46:1537-40.
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74. CREMNITER J , Bauer T, Lortat-Jacob A, Vodovar D, et al
    Prosthetic hip infection caused by Tropheryma whipplei.
    J Clin Microbiol. 2008;46:1556-7.
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75. DAMBORG P , Guardabassi L, Pedersen K, Kokotovic B, et al
    Comparative analysis of human and canine Campylobacter upsaliensis isolates by amplified fragment length polymorphism.
    J Clin Microbiol. 2008;46:1504-6.
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76. AKERLUND T , Persson I, Unemo M, Noren T, et al
    Increased sporulation rate of epidemic Clostridium difficile Type 027/NAP1.
    J Clin Microbiol. 2008;46:1530-3.
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77. TALUKDER KA , Aslam M, Islam Z, Azmi IJ, et al
    Prevalence of virulence genes and cytolethal distending toxin production in Campylobacter jejuni isolates from diarrheal patients in Bangladesh.
    J Clin Microbiol. 2008;46:1485-8.
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78. ESPOSITO S , Bosis S, Niesters HG, Tremolati E, et al
    Impact of human bocavirus on children and their families.
    J Clin Microbiol. 2008;46:1337-42.
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79. GIAKKOUPI P , Vourli S, Polemis M, Kalapothaki V, et al
    Supplementation of growth media with Zn2+ facilitates detection of VIM-2-producing Pseudomonas aeruginosa.
    J Clin Microbiol. 2008;46:1568-9.
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80. ALVAREZ J , Garcia IG, Aranaz A, Bezos J, et al
    Genetic diversity of Mycobacterium avium isolates recovered from clinical samples and from the environment: molecular characterization for diagnostic purposes.
    J Clin Microbiol. 2008;46:1246-51.
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81. SULAIMAN IM , Sammons SA, Wohlhueter RM
    Smallpox virus resequencing GeneChips can also rapidly ascertain species status for some zoonotic non-variola orthopoxviruses.
    J Clin Microbiol. 2008;46:1507-9.
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82. GRIFFITHS TA , Rioux K, De Buck J
    Sequence polymorphisms in a surface PPE protein distinguish types I, II, and III of Mycobacterium avium subsp. paratuberculosis.
    J Clin Microbiol. 2008;46:1207-12.
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83. IVANCIC V , Mastali M, Percy N, Gornbein J, et al
    Rapid antimicrobial susceptibility determination of uropathogens in clinical urine specimens by use of ATP bioluminescence.
    J Clin Microbiol. 2008;46:1213-9.
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84. SHARMA S , Ray P, Gentsch JR, Glass RI, et al
    Emergence of G12 rotavirus strains in Delhi, India, in 2000 to 2007.
    J Clin Microbiol. 2008;46:1343-8.
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85. HU Q , Coburn B, Deng W, Li Y, et al
    Salmonella enterica serovar Senftenberg human clinical isolates lacking SPI-1.
    J Clin Microbiol. 2008;46:1330-6.
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86. GLASSON JH , Guthrie LH, Nielsen DJ, Bethell FA, et al
    Evaluation of an Automated Instrument for Inoculating and Spreading Samples onto Agar Plates.
    J Clin Microbiol. 2008;46:1281-4.
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87. SAVINI V , Catavitello C, Talia M, Manna A, et al
    Multidrug-resistant Escherichia fergusonii: a case of acute cystitis.
    J Clin Microbiol. 2008;46:1551-2.
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88. CHEN Y , Knabel SJ
    Prophages in Listeria monocytogenes contain single-nucleotide polymorphisms that differentiate outbreak clones within epidemic clones.
    J Clin Microbiol. 2008;46:1478-84.
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89. CONVILLE PS , Brown JM, Steigerwalt AG, Brown-Elliott BA, et al
    Nocardia wallacei sp. nov. and Nocardia blacklockiae sp. nov., human pathogens and members of the "Nocardia transvalensis Complex".
    J Clin Microbiol. 2008;46:1178-84.
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90. GILLIGAN PH
    Is a two-step glutamate dehyrogenase antigen-cytotoxicity neutralization assay algorithm superior to the premier toxin A and B enzyme immunoassay for laboratory detection of Clostridium difficile?
    J Clin Microbiol. 2008;46:1523-5.
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91. KAWATSU K , Kumeda Y, Taguchi M, Yamazaki-Matsune W, et al
    Development and evaluation of immunochromatographic assay for simple and rapid detection of Campylobacter jejuni and Campylobacter coli in human stool specimens.
    J Clin Microbiol. 2008;46:1226-31.
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92. MOREIRA FC , Vieira MA, Ferreira AJ, Girao DM, et al
    Escherichia coli strains of serotype O51:H40 comprise typical and atypical enteropathogenic E. coli strains and are potentially diarrheagenic.
    J Clin Microbiol. 2008;46:1462-5.
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93. ZLOSNIK JE , Hird TJ, Fraenkel MC, Moreira LM, et al
    Differential mucoid exopolysaccharide production by members of the Burkholderia cepacia complex.
    J Clin Microbiol. 2008;46:1470-3.
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94. VALESCO M
    Stability of frozen, heat-killed cultures of Coccidioides immitis as positive- control material in the gen-probe AccuProbe Coccidioides immitis culture identification test.
    J Clin Microbiol. 2008;46:1565.
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95. SPERRY KE , Kathariou S, Edwards JS, Wolf LA, et al
    Multiple-locus variable-number tandem-repeat analysis as a tool for subtyping Listeria monocytogenes strains.
    J Clin Microbiol. 2008;46:1435-50.
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